Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0017 ATGCAGGATGCTGAAAGTTGTTCAAGACAAGATTATAATGTCAGCTTCTCTATGATTGTAGCGTCATGTATTGGGTTGATCATTGTTGTAGCCATTTATTATCGCCTCAAACAGATCAGAGATCGAAAGATCATTCCATATGTCAGATTATCACGCTCTGGCCACGTCCCTAAGCTTGAAAGATTCTCCCATTATGTAGCTAGGCAAATGGGGTTCAAAGATAGGAGAAGTTGTCCTCATCTATGTAGATTGGCTTCTGAATACATAAGGAAATGTGAGGGATGTGAAGATGACATATATGCCTTCTTTGAGAATGAACCTGATGCAGATTCTCTTTATGTGAAGCTGGTGGAGGAGTTTGAGAGATGCATTCTTAGTTACTTTGGGTTCCATTGGAGACATGGTGATCTAATGATGACTCAGGTTTTGACCTCTGAAACTGAGCCAAGAAGGAAGCTCAAACAAATAGTTATGGCTGCAACCAGGGAACAAAGGTTCGAGAGAGTTACTAAGAATCTGAAGGTGGCAAGAGTTTTTAACACATTGGTGGAAGAGATGAAAGCAATGGGAATAGCAGCACCTGATGACTCTCAATGTACAGAGGTAATGGCTCCAATGGCTCACAGTGATAGGAGCCCTGTGCTCCTCCTCATGGGGGGAGGTATGGGAGCTGGCAAGAGTACAGTACTCAAGGACATTCTCAAAGAACCTTTATGGGCAGGAGCAGCAGGGAATGCTGTAATCATTGAAGCAGATGCCTTCAAAGAATCAGATGTCATCTATAGGGCCCTTAGCTCAAGAGGGCATCATCATGACATGATTCGAACAGCTGAACTGGTACACCAATCATCCACGGATGCAGCCTCATCCCTCCTTGTAACGGCACTAAATGAGGGGCGAGATGTAATTATGGATGGCACACTCTCCTGGATACCATTTGTTGTGCAGACAGTCACAATGGCCAGAAATGTCCACCGCCGCCGTTACCGCATGGGACCTGGCTACAGGGTGAATGAGGATGGAAATGTAACTGAAAACTATTGGGAGCGAACTGAAGATGAACAACCTGAACAGTTTGGAGGCAAAAAGAGAAAACCATATAGAATAGAGCTGGTTGGAGTAGTATGTAATGCTTACCTTGCAGTTGTAAGAGGCATAAGGAGAGCTGTCACAACTAGAAGAGCAGTAAGAGTAAAACCACAGTTGAAATCCCACAAGAGATTTGCTGAAGCATTTATGACTTATTGTCAACTAGTAGACAATGCCAGGTTATACTGCACAAATGTGTTGGATGGCCCAGCCAAGTGTGTTAGCAAAAAATATAGTGGTGACATTATAAGTGTTGTGAAGTTGATAGGATGGAAAGATAGAGACAAAACACTGCTAGTTGATCCAGATGAAATAGACTGTTTGAAGAGGGCTGCAAAGTTGAATGAAGATGCAGACTCTATATATGAACTTTACAAGCATCCAAACCCAGCTCTTAGGGCTGGATCAGTATGGAAAGACATTGTATTATCTCCTTCAAGGTTGAACATCCAACAGGAGCTCAAGTATTCAATCCAAAAGATCGAGAACATGAAAAATTATAACCTCAAGGAGCACAAATGA 1611 0.4271 MQDAESCSRQDYNVSFSMIVASCIGLIIVVAIYYRLKQIRDRKIIPYVRLSRSGHVPKLERFSHYVARQMGFKDRRSCPHLCRLASEYIRKCEGCEDDIYAFFENEPDADSLYVKLVEEFERCILSYFGFHWRHGDLMMTQVLTSETEPRRKLKQIVMAATREQRFERVTKNLKVARVFNTLVEEMKAMGIAAPDDSQCTEVMAPMAHSDRSPVLLLMGGGMGAGKSTVLKDILKEPLWAGAAGNAVIIEADAFKESDVIYRALSSRGHHHDMIRTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWIPFVVQTVTMARNVHRRRYRMGPGYRVNEDGNVTENYWERTEDEQPEQFGGKKRKPYRIELVGVVCNAYLAVVRGIRRAVTTRRAVRVKPQLKSHKRFAEAFMTYCQLVDNARLYCTNVLDGPAKCVSKKYSGDIISVVKLIGWKDRDKTLLVDPDEIDCLKRAAKLNEDADSIYELYKHPNPALRAGSVWKDIVLSPSRLNIQQELKYSIQKIENMKNYNLKEHK 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0017 536 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 10 531 - -
Lal20g0017 536 PANTHER UNCHARACTERIZED 10 531 IPR044802 -
Lal20g0017 536 Pfam Zeta toxin 207 320 IPR010488 GO:0005524|GO:0016301
Lal20g0017 536 Gene3D - 196 431 IPR027417 -
Lal20g0017 536 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 338 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0017 Lal-Chr20 149633 153626 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0017 - - gmx:100794775 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0017 20 149633 153626 Lal12g0175 12 1225845 1229180 PCT
Lal20g0017 20 149633 153626 Lal24g0137 24 992664 998491 PCT
Lal12g0175 12 1225845 1229180 Lal20g0017 20 149633 153626 PCT
Lal24g0137 24 992664 998491 Lal20g0017 20 149633 153626 PCT