Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0016 ATGCAGCATATTAAAGCTATTATCACCGCAAAAGAGGTATTCCTTAGAGACCCAAAAGATGATGATGTTGTGCCTATTTTGGAGGAACTTCGGCGACGGTTACCCAAAGTAAATTGTTCTGGTCAAGGAGAAGAAGACAAGTCTACTCAAGAAGGCGAAGGTGGAGAAGAAAATGAATTTCCATTTGAGTTCCGGGCTTTAGAAGTTGCATTAGAAGCAATATGTAGTTTCCTTGATGCAAGGACAAGAGAGTTAGAGACTGCTGCTTATCCAGCTTTGGATGAACTCACCTCTAAGATCAGCAGTCGTAATTTGGATAGAGTGCGCAAATTGAAAAGTGCAATGACAAGGTTGACAAGTCGAGTTCAAAAGATAAGAGATGAACTAGAAAACCTACTTGATGATGACGATGACATGGCTGAACTTTACTTATCAAGAAAGTTAGTTGTTTCATCTTCTCCCACCAGTAACTCTGATTCTCCAAACTGGCAATTTAACTCTCCAAATCTTGCTTCTAAGATACACACATCAAGTACTACAACAGTTCATATGGAGAATGATATTGAGGAGCTAGAAATGTTACTCGAGGCCTATTTCATGCAAATTGATGGGACATTAAATAAACTGGCCACATTGAGAGAATATACCGATGACACAGAAGATTACATCAACATTCAGCTAGACAATCACAGAAATCAACTGATTCAGCTAGAGCTCTTCCTTTGTTCCGGAACTGTTTCTCTCTCCATATATTCATTGGTGGCAGCAATATTCGGTATGAACATTCCATATACATGGAAACAAGGTCACGAATATATATTTAAATGGGTGGTGATCCTTACGGGAATGGTTTGTGCATCATTGTTTCTATCCATAGTATCTTATGCCCGACGCAAAGGCATTGTTGGGTCTTGA 915 0.3934 MQHIKAIITAKEVFLRDPKDDDVVPILEELRRRLPKVNCSGQGEEDKSTQEGEGGEENEFPFEFRALEVALEAICSFLDARTRELETAAYPALDELTSKISSRNLDRVRKLKSAMTRLTSRVQKIRDELENLLDDDDDMAELYLSRKLVVSSSPTSNSDSPNWQFNSPNLASKIHTSSTTTVHMENDIEELEMLLEAYFMQIDGTLNKLATLREYTDDTEDYINIQLDNHRNQLIQLELFLCSGTVSLSIYSLVAAIFGMNIPYTWKQGHEYIFKWVVILTGMVCASLFLSIVSYARRKGIVGS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0016 304 CDD Mrs2_Mfm1p-like 1 301 IPR039204 -
Lal20g0016 304 MobiDBLite consensus disorder prediction 37 57 - -
Lal20g0016 304 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 2 304 IPR039204 -
Lal20g0016 304 PANTHER MAGNESIUM TRANSPORTER MRS2-LIKE PROTEIN 2 304 - -
Lal20g0016 304 Coils Coil 108 135 - -
Lal20g0016 304 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 241 290 IPR045863 -
Lal20g0016 304 Gene3D Magnesium transport protein CorA, transmembrane region 24 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0016 Lal-Chr20 140157 152389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0016 1 277 MRS2 Gene Family AT5G64560 73.171 1.21e-127 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0016 K16075 - gmx:100799368 462.996