Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0009 ATGGGAAGCAGAGAGAATATCTACCCTTCAGCCATGAACGTTGAGAGTGTACAAAGGGTAGCTATCCCTCCACCAAAGCCGTTCTTAATATCTCTAAAGTACTCTCTGAAAGAGACTTTCTTCCCAGATGACCCATTGAAGCAGTTCAAAAACCAACCAGCTTTAAGGAGGTTATTGCTTGGCCTTCAATACTTCTTCCCTATATTCCAATGGGGCCCACAGTACACTTTGAAGTTCTTGAAATCAGACATCATTTCTGGGATTACCATAGCTAGCTTGGCTATTCCTCAAGGCATCAGTTATGCTAAGCTCGCCAACCTCCCTCCAATTCTTGGACTTTATTCGAGCTTTATACCACCAATTATTTATGCGATGATGGGTAGCTCAAAGGATTTGGCAGTGGGAACAATGGGAGTTGGATCACTTCTTATGGCTTCAATGTTGGGGACTGAAGTTAATGTAAATGAGAACCCAGAACTTTTCCTCCACCTTGCTTTCACTGCTACATTCTTTGCTGGACTCATGCAAACATTATTTGGTCTCTTTAGGCTAGGTTTGATCGTGGATTTTCTGTCACATGCAGCCATAGTAGGGTTCATGGGAGGAGCAGCCACTGTGGTTTGTCTGCAACAACTGAAATCCATTCTTGGACTTCGACATTTCACTCATAACTCTGATGTTGTCTCAGTAATGCGATCTCTTTTTACTCAAACTCATGAGAGTAAACGAAAACCGAGGTTGTTCTGGGTGTCAGCAATGTCACCGTTAATATCTGTTATTTTGGGAAGCTTGTTGGTTTATTTCACCCACGCTGAGAAGCACAACATTGCCGTGATTGGAGAATTAAAGAAGGGGCTAAATCCACCTTCAGTCACAGATTTGGTGTTTGGGTCACCTCATATGATTATAGCCATCAAAACTGGTGTTATCACTGGCATTATTGGACTAGCGGCAATAAACCCAAAGTCAGCAAATTCACTTCTGACTGAGACATTCCATAAGCCTGACTCAGCCATGACTAAGTCAAGTAATGCGCCTCGCCCAAGGCCACAAGCCAAGGCCAAAGCTGACACGGTCAGTCAGGAACCACAATGCACCAAGAGGCCAAGCCACCTCGGTCAGGTTCAGGCCAAAGCCAAGACACATGCACCAGCATGCCAAAGGCCACAAGCCAAGACCAGGACTGACACGGAGGGAATAGCTGTGGGAAGAAGCTTTGCAATTTTAAAGAATTACCATATTGATGGCAACAAAGAGATGATTGCTTTTGGAATGATGAACATAGTTGGTTCTTTCACCTCTTGCTACCTTGTAGCAGGACCATTTTCGCGTACAGCTGTGAACTACAACGCCGGCTGCAAGACTCCAGCATCAAACATTATAATGGCAGTTGCAGTAATGTTGACATTGTTATTCTTGACACCCTTGTTCTATTATACTCCTTTGGTTGTGCTAGCAGCCATGCTTGTATCTGCAATGATTGGACTCATAGATTATGAAGCAGCCATTCATTTGTGGAAAATTGATAAATTTGATTTCCTAGTGTGCATCAGTTCATATATTGGAGTGGTCTTCGGTAGTATTGAAATTGGCTTAGTCATAGCAGTTGGGATATGTGTACTTAGAGTACTTTTATTTGTTGCTAGGCCAAAGACATTTGCTCAAGGCAACATTCCAAACTCTGGATTATATAGAAATGTGGAACAGTATCCAAATGCAAACCATATTCCTGGAATCCTAATTCTTGAAATTGCTGGGCCAATTTACTTTGCCAATGCAGGCTATTTAAGAGAGAGGATCACAAGGTGGATTATTGATGAGGAAGACAGAATTAAAGCTACAGGGAATAGTAATATCAATTTGCAGAATATTATAATTGATATGACTGCTGTTGGGAACATCGATACAAGTGGAATAAGCATGCTTGAAGAGCTCTTGAAGATTCTTAGCAGAAGAGGGCTACAACTTGTTTTGGTCAATCCTGGAAGCGAGGTGATGAAGAAATTCAACAAAGCCAAGTTCCTTGATGAAATAGGCCACACATGGATTTACCTTACAGTTGAAGAAGCTGTTGGAGCATGCAACTCCATTCTCGACACATGCAAATCAAACCACACAAAAGATGAATCAGAAGGGGGTAGCAATGTCTGA 2151 0.4231 MGSRENIYPSAMNVESVQRVAIPPPKPFLISLKYSLKETFFPDDPLKQFKNQPALRRLLLGLQYFFPIFQWGPQYTLKFLKSDIISGITIASLAIPQGISYAKLANLPPILGLYSSFIPPIIYAMMGSSKDLAVGTMGVGSLLMASMLGTEVNVNENPELFLHLAFTATFFAGLMQTLFGLFRLGLIVDFLSHAAIVGFMGGAATVVCLQQLKSILGLRHFTHNSDVVSVMRSLFTQTHESKRKPRLFWVSAMSPLISVILGSLLVYFTHAEKHNIAVIGELKKGLNPPSVTDLVFGSPHMIIAIKTGVITGIIGLAAINPKSANSLLTETFHKPDSAMTKSSNAPRPRPQAKAKADTVSQEPQCTKRPSHLGQVQAKAKTHAPACQRPQAKTRTDTEGIAVGRSFAILKNYHIDGNKEMIAFGMMNIVGSFTSCYLVAGPFSRTAVNYNAGCKTPASNIIMAVAVMLTLLFLTPLFYYTPLVVLAAMLVSAMIGLIDYEAAIHLWKIDKFDFLVCISSYIGVVFGSIEIGLVIAVGICVLRVLLFVARPKTFAQGNIPNSGLYRNVEQYPNANHIPGILILEIAGPIYFANAGYLRERITRWIIDEEDRIKATGNSNINLQNIIIDMTAVGNIDTSGISMLEELLKILSRRGLQLVLVNPGSEVMKKFNKAKFLDEIGHTWIYLTVEEAVGACNSILDTCKSNHTKDESEGGSNV 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0009 716 ProSiteProfiles STAS domain profile. 569 694 IPR002645 -
Lal20g0009 716 CDD STAS_SulP_like_sulfate_transporter 570 687 - -
Lal20g0009 716 ProSitePatterns SLC26A transporters signature. 109 130 IPR018045 GO:0008271|GO:0008272
Lal20g0009 716 PANTHER SULFATE TRANSPORTER 397 714 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal20g0009 716 PANTHER SULFATE TRANSPORTER 5 240 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal20g0009 716 PANTHER SULFATE TRANSPORTER 241 317 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal20g0009 716 MobiDBLite consensus disorder prediction 335 371 - -
Lal20g0009 716 PANTHER SLC26A/SULP TRANSPORTER-RELATED 397 714 - -
Lal20g0009 716 PANTHER SLC26A/SULP TRANSPORTER-RELATED 241 317 - -
Lal20g0009 716 PANTHER SLC26A/SULP TRANSPORTER-RELATED 5 240 - -
Lal20g0009 716 MobiDBLite consensus disorder prediction 357 371 - -
Lal20g0009 716 Pfam STAS domain 570 690 IPR002645 -
Lal20g0009 716 Pfam Sulfate permease family 80 317 IPR011547 GO:0016021
Lal20g0009 716 Pfam Sulfate permease family 397 517 IPR011547 GO:0016021
Lal20g0009 716 Gene3D STAS domain 564 698 IPR036513 -
Lal20g0009 716 SUPERFAMILY SpoIIaa-like 572 694 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0009 Lal-Chr20 80727 87947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0009 62 691 Inorganic Solute Cotransporters AT1G77990 41.614 5.03e-148 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0009 K17471 - gmx:100791091 500.36