Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2339 ATGAAGAGCGTGGTTTCGTCTTCTTCGTACGGTGGAAAAAGACGATGGAAAGGGCTTATAATTGCGATATTGGGACTCGTCATTCTATCAATGCTTGTTCCTCTCCTCTTTTTACTCGGCCTTCACAATGGATTTCACTCTCCTTCAGGGAGAACAATCGAACCGCTTGCAGGACCTGATAACAAAGTTCGAACCGACTCTTCCAAAGGTTCTCTGCATAATACTCTGGTGGATGCTCTCAAGAAGTATGCTCGAGAAGATAAGAATGGCACCATCAACAGGGGCTCCAATGATGATAAACTAAGAGGTTTTAAGGTGCCACCTAGTGCTGTTCAGCAACCACCTCCATCGTCTTCAAATAATTCTAGAGTTGGTCACATTGATCATGTCACCCGCGTTAAAACAAGCTCCAATGATGAAGGTGGAAAGTCATGCGAGCTCACATTTGGTAGTTATTGCCTATGGCAAGAGGAGCATAAAGAAGATATGAAAGATGTTATGATTAAGAAATTGAAAGATCAATTGTTTGTGGCTAGATCTTACTATCCTAGCATTGCAAAACTCCCAGCACAGGACAAGTTGTCACGTCAACTCAAACAGAACATACAAGAGCTGGAGCACGTGCTTAGTGAATCTACTACAGATGCTGATCTTCCACCACTGATTGAGAAGAAGTCACATAAGATGGAAGTTGCAATAGCCAGAGCTAAATCAGTACCGTTAGATTGCAATAATGTTGACAAGAAATTGAGACAAATATTTGATTTGACTGAGGATGAAGCTGATTTTCATATGAAACAGAGTGCATTCCTGTATAAACTTAATGTTCAGACAATGCCAAAGAGTCTTCATTGCATGTCACTGAAACTAACTGTAGAATATTTCAAATCTTCACATTATGAAGAGAAGGCCGCTGTAGAAAAGTTTAAGGATTCTTCATTGCATCATTATGTTATTTTCTCTAATAATGTGCTTGCAGCATCAGTAGTTATCAACTCCACTGTAATGCATGCAAAGGAAAGTCAGAATCAGGTTTTTCACGTCTTGACTGATGGGCAGAATTATTATGCTATGAAGCTCTGGTTCTTGAGGAACAAGTATAAGGAAGCTGCTATTCAAGTGATGGATGTCGAGCATCTTGACCCGGACAGCCAAAAGGGTGACCCACTGCATCTGTCCTTGCCTGAGGAGTTCCGTGTTTCATTTCACAATGTTGATAATCCATCCATGAGCCAGATTAGAACAGAATACATTTCAATTTTTTCTCATTCACACTATTTACTTCCTGATATATTTAGGAGTTTGAACAAAGTTGTGGTTCTGGATGAAGATGTTGTTATCCAACAAGACTTGTCAGCCCTGTGGAATCTACAATTGGGAGAAAAAGTTAATGGTGCAGTGCAATTCTGCTCAGTAAGACTGGGTCGCTTGAAAAGTTATCTGGGTCAGAAAGGTTTCAATCCAAATTCCTGTTCTTGGATGTCAGGGTTGAACATAATTGACCTAGTAAGGTGGAGAGAGCTTGGTCTTACACAAACTTACCAAAGGTTGATAAAGGAGTTGAGCATACAAGATGGATCAATGAAAGGTAGTGCATGGCCTGCAAGCTTGGTGACCTTCGACAGTAAAATATATCCACTCAATGAATCATGGGTTGTGTCTGGACTGGGTCATGATTATGTAATTGATACTCAAGTCATTAATACAGCTCCAGTACTGCACTATAATGGGAAAATGAAACCTTGGCTAGATATGGGAATTCCTAAGTATAAGAGCTATTGGAAGAAGTTTCTGAACAAAGAAGATCAGCTCTTAAGTGAGTGCAATGTATATTCATAA 1839 0.4002 MKSVVSSSSYGGKRRWKGLIIAILGLVILSMLVPLLFLLGLHNGFHSPSGRTIEPLAGPDNKVRTDSSKGSLHNTLVDALKKYAREDKNGTINRGSNDDKLRGFKVPPSAVQQPPPSSSNNSRVGHIDHVTRVKTSSNDEGGKSCELTFGSYCLWQEEHKEDMKDVMIKKLKDQLFVARSYYPSIAKLPAQDKLSRQLKQNIQELEHVLSESTTDADLPPLIEKKSHKMEVAIARAKSVPLDCNNVDKKLRQIFDLTEDEADFHMKQSAFLYKLNVQTMPKSLHCMSLKLTVEYFKSSHYEEKAAVEKFKDSSLHHYVIFSNNVLAASVVINSTVMHAKESQNQVFHVLTDGQNYYAMKLWFLRNKYKEAAIQVMDVEHLDPDSQKGDPLHLSLPEEFRVSFHNVDNPSMSQIRTEYISIFSHSHYLLPDIFRSLNKVVVLDEDVVIQQDLSALWNLQLGEKVNGAVQFCSVRLGRLKSYLGQKGFNPNSCSWMSGLNIIDLVRWRELGLTQTYQRLIKELSIQDGSMKGSAWPASLVTFDSKIYPLNESWVVSGLGHDYVIDTQVINTAPVLHYNGKMKPWLDMGIPKYKSYWKKFLNKEDQLLSECNVYS 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2339 612 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 316 605 IPR029044 -
Lal1g2339 612 PANTHER GALACTURONOSYLTRANSFERASE 7-RELATED 10 611 - -
Lal1g2339 612 MobiDBLite consensus disorder prediction 87 101 - -
Lal1g2339 612 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 10 611 IPR029993 GO:0047262
Lal1g2339 612 Pfam Glycosyl transferase family 8 286 585 IPR002495 GO:0016757
Lal1g2339 612 MobiDBLite consensus disorder prediction 87 124 - -
Lal1g2339 612 SUPERFAMILY Nucleotide-diphospho-sugar transferases 316 608 IPR029044 -
Lal1g2339 612 Coils Coil 195 215 - -
Lal1g2339 612 CDD GT8_like_1 315 599 - -
Lal1g2339 612 MobiDBLite consensus disorder prediction 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2339 Lal-Chr1 25235746 25244850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2339 13 523 Glycosyltransferase AT2G38650 55.641 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2339 K13648 - gmx:100795264 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1736 9 19564912 19573499 Lal1g2339 1 25235746 25244850 LSH