Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2337 ATGGGCAATTGCGGTACTCGTGAGGAATCTGCTGTCATTTCCAATGTTCAAGTTCAACAATCTGCCTGTACTACTACTACTATGACTACTATTTCTTCCTCTTCTAAGAAGCAGCACCACAATCGTTCCGTCTCAGATCCAATCGACTCATGTTCAACCCCACGAGATGACGTCAGAAATAACAACACCCTCCTTTATACACACGTCATTGCTTTTACCCTCTACGAGTTGGAGACTATAACTAAGAGCTTTCGTTCTGACTACATCCTTGGTGAAGGTGGATTCGGCATTGTATATAAAGGCTACATTGATGAGAATCTCAGGGTTGGTCTCAAATCTCTCCCTGTTGCTGTCAAGGTTCTCAACAAGGAAGGCCTTCAAGGACATCGAGAGTGGCTTACCGAAGTCAATTTTCTGGGGCAGCTAAGGCATCCCAATCTTGTTAAATTGATCGGCTACTGCTGCGAGGAGGACCACAGGCTGCTTGTCTATGAATTCATGTTTCGAGGAAGTCTAGAAAATCACCTTTTCCGAAAGGCAACTGTCCCTTTATCATGGGCTACAAGAATGATGATTGCTTTAGGAGCTGCCAAAGGACTTGCCTTTCTCCACAATGCTGAAAGGCCAGTAATCTATCGTGACTTCAAAACGTCTAATATATTATTGGACTCTGACTATACAGCCAAGCTTTCTGATTTTGGACTTGCTAAAGCAGGACCACAAGGTGATGAAACCCATGTATCCACCCGGGTCATGGGGACATATGGCTATGCTGCCCCTGAATATGTAATGACTGGCCACCTGACAGCCAGGAGTGATGTGTATAGCTTCGGAGTTGTCCTTTTGGAGCTCTTAACTGGAAGGAAATCTGTTGACAAGACAAGGCCTGGAAAGGAACAGAGCTTGGTAGACTGGGCACGACCAAAACTTAATGACAAAAGGAAGCTTCTACAAATAATTGATCCTAGATTGGAGAATCAATACTCAGTCAGAGCAGCACAGAAGGCATGTAGCTTGGCTTACTACTGCCTGAGCCAAAATCCCAAAGCCAGGCCACTAATGAGTGATGTAGTTGAGACATTGGAACCCTTACAAAGTTCTAGTGTTGGTGCAGGTGAAGTCTCATTGTCAGGATCTAATAGTGGAAATGGCAGTGGGCCTTTCGCTATGAACAAAATCTCCGACTACCGGATGCGTCACAAGTTTTCAAACAATGTTGGTCCAGGTTCCACGTGTCGGTCTCCGAACCCAAATTGCTCACCTGGTGCTCCAGCAGCATGCCGAGTCAGATGA 1293 0.4548 MGNCGTREESAVISNVQVQQSACTTTTMTTISSSSKKQHHNRSVSDPIDSCSTPRDDVRNNNTLLYTHVIAFTLYELETITKSFRSDYILGEGGFGIVYKGYIDENLRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEEDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPGKEQSLVDWARPKLNDKRKLLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSSSVGAGEVSLSGSNSGNGSGPFAMNKISDYRMRHKFSNNVGPGSTCRSPNPNCSPGAPAACRVR 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2337 430 ProSiteProfiles Protein kinase domain profile. 84 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2337 430 ProSitePatterns Protein kinases ATP-binding region signature. 90 119 IPR017441 GO:0005524
Lal1g2337 430 CDD STKc_IRAK 90 364 - -
Lal1g2337 430 MobiDBLite consensus disorder prediction 29 54 - -
Lal1g2337 430 PANTHER OS01G0588500 PROTEIN-RELATED 27 417 - -
Lal1g2337 430 Gene3D Transferase(Phosphotransferase) domain 1 167 374 - -
Lal1g2337 430 Pfam Protein tyrosine and serine/threonine kinase 89 361 IPR001245 GO:0004672|GO:0006468
Lal1g2337 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Lal1g2337 430 Gene3D Phosphorylase Kinase; domain 1 49 166 - -
Lal1g2337 430 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL8-RELATED 27 417 - -
Lal1g2337 430 MobiDBLite consensus disorder prediction 407 430 - -
Lal1g2337 430 SUPERFAMILY Protein kinase-like (PK-like) 64 362 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2337 Lal-Chr1 25208922 25212728 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2337 72 371 Glycoside Hydrolase AT3G07070 53.795 3.10e-108 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal1g2337 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2337 - - gmx:102662348 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g2337 1 25208922 25212728 Lal1g2337 1 25208922 25212728 ECH