Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2313 ATGAGTCCTGATCAACCTCTTCTTTCCCAAACACCCCTTCCTCTTTCTTCTTCTTCCTCCTCTTCTCAGATCCGTTACCGTAACAGATCCACTTCTTTTTCTTCCTTAGACGACTTCAATAACAATAACGTTAACATCATCCCCATCCACCACAACGACGTCGTTTTACTCCTTCATCAACATCAACATCAACATCAAGCTTCCCTCGACTTCAACAACATCATCAACAACAACGACAACATCGACAACGCATGCTCTTCAACACGAATGGTATCATTTGCTGCAATGGAACTGCAGCAACTTCATGATACCAATAATAATACTACGTCGTTTCAAATCTCTTCTTCAAATCCTAACCTTAACAATACCACACCGTATCATACTCGTCACAAGAGCGTTCAATTCGAAGATCCTATTCTACATGAAGATTCTTCGCCAAGGTTGATTTACATAAATGACCCTAACACAACCAATGATAAGTATGATTTCACAGGGAACGAGATAAGGACGAGTAAATACACTGTCCTCACTTTCTTACCTAAGAATCTCTTCATACAGTTTCATCGTGTTGCGTATTTGTATTTCCTCGCCATTGCAGCACTTAATCAGCTTCCTCCATTGGCTGTTTTTGGCAGAACTGTTTCACTTTTCCCCTTATTGTTTGTCCTATGTGTTACCGCTATTAAGGATGGGTATGAGGATTGGCGGAGGCATCGGTCGGATCGTAATGAGAACAATCGAGAGTCTTTGGTGCTTCAATTTGGGGATTTTAGGTCAAAGAAGTGGAAAAACATAGAAGTTGGTGAAGTTGTTAAGATTTTCGCTGACGAGACAATTCCAGCAGATATGGTGTTGTTGGGGACGAGTGATCAGAGCGGTCTTGCTTATATTCAGACAATGAATTTGGATGGAGAGTCAAATTTGAAAACTAGGTATGCTAAACAGGAGACAACTTCGGCCGTTTCTTCTGAAGTTTGTAATGTATGTGGGGTCATTAGATGTGAGCCACCGAACCGGAATATTTATGAGTTCACCGCGAATATGGAGTTCAATGGGGTTAAGTTTTCACTAAGCCAATCCAACATTGTGTTGCGCGGTTGCCAGCTTAAGAACACAGATTGGATCATTGGTGTTGTTGTTTATGCAGGACAGGAAACAAAAGCAATGATGAACAGTGCAATTTCACCTTCAAAAAGAAGCAGATTGGAAACTTATATGAACAGGGAAACACTTTGGTTGTCTATTTTTCTGTTTATAATGTGTTTAGTTGTGGCCATTGGGATGTGTCTTTGGCTTGTTCGTCACAAGGACCAGATTGATACATTGCCCTACTACAGAAAAATATACTTCAATGATGGACCAGATAATGGAAAGAGATATAAGTACTATGGGATCCCAATGGAAGCTTTTTTCTCATTTTTGAGTTCTGTTATAGTGTTTCAGATAATGATACCGATATCTCTTTACATTACAATGGAGTTGGTTCGTTTGGGACAGTCATACTTCATGATTGAAGATGGGGACATGTATGATGCTTGCTCTGGATCAAGATTTCAGTGTAGATCTTTGAACATAAATGAAGATTTGGGCCAAATACGCTACATATTTTCAGACAAGACAGGAACATTAACAGAAAACAAAATGGAATTCCGGAGAGCCAGTGTGCATGGGAAGAATTATGGGGGCTCCTTGCTTATGGCTGATAACAATACAGCCGCAGCAGCTGTTATTCGTAAACGCAGGTGGGAGCTAAAATCTGAAATTGCAGTTGATTCCGAACTGGTGAAAATGTTGCATGAAGACTCAAACAGGGATGCAAGAATTGCTGCTCATGAGTTTTTTCTTACATTGGCTGCATGTAATACTGTGATCCCTATACTTAACGGTGGTGGGGGGTTTGCCAGTATTGCAGCAAGTGAATCAAATGAAGACACAGTAGGCATTGATTACCAGGGAGAATCTCCGGATGAACAGGCTCTTGTTTCTGCAGCCTCTGCATATGGATATACTCTTTTTGAGCGAACATCTGGACATATTGTTCTGGATGTCAATGGTGAGAAACTCAGGTTGGACGTATTGGGCCTGCACGAGTTTGATAGTGTGCGGAAGAGGATGTCTGTCGTTATTCGGTTTCCTAATAATGTTGTAAAGGTGCTAGTCAAAGGTGCTGATACCTCAATGTTTAGCATTTTAGCAAATGAGAGTGAGACCAATAATAGCATACATCATGCAACAGAAGGCCATTTAAGTGAATATTCTTCAGTGGGTCTGCGCACTCTTGTAATAGCCTCCAGGGATCTTTCAGCTGCTGAACTTGAGAAGTGGCAAAACGCGTATGAAGATGCAAGCACTTCGTTGACTGACAGAACTGCTAAACTACGTCAGACGGCATCTCTTATAGAGTGCAACTTAAAGCTGCTTGGAGCAACTGGAATTGATGATAAGCTTCAAGAGGGTGTACCAGAAGCTATTGAGTCGTTGCGGCAAGCTGGGATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACAGCAATTTCAATTGGCCTTTCCTGCAAACTTCTGAGTCCAGATATGGAGCAGATTATTATAAATGGCACTTCAGAGGTTGAATGCAGAAATCTTTTGGATGAAGCCAAAGCCAAATATGGTGTTAGATCTTCATACATTGGGAAAAAGAATCTCAAGCAGAAAACGAATGCTGATATTTCCCAGGATTCAATGTCATTAAGCTTGCCCAAGTGGAATCCAGTAAAGGAAGACGGAATCACTGCTCCATTGGCACTGATAATTGATGGAAACAGTTTGGTTTATATTTTGGAGAAAGAACTGGAGCCAGAGCTTTTCGACCTTGCAACTTCCTGTAGGGTTGTCCTTTGCTGTCGTGTTGCACCCTTGCAGAAAGCAGGAATTGTTGATATGATAAAGAGCCGCACAGATGATATGACACTGGCCATCGGTGATGGGGCCAATGATGTGTCAATGATCCAGATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAGGGACGCCAAGCTGTGATGGCATCAGATTTTGCTATGGGACAATTTCGGTTCTTAAAAAAATTACTTCTGGTTCATGGGCACTTGAATTATCAGCGTGTTGGTTATTTAGTTCTGTACAACTTCTACCGCAATGCTGTCTTTGTACTGATGTTATTCTGGTATATATTATGCACTGCTTTTTCTACAACTTCTGCATTAACAGATTGGAGTAGTGTATTCTATTCTTTGATCTACACATCTGTACCTACAATTATTGTTGGTATTCTGGACAAAGACTTGAGTCATAAGACACTCTTGAAGTATCCAAAACTGTATTGTACAGGTCACCGGCAAGAAGCTTACAATATGCAATTATTTTGGATCACAATGATTGACACAGTATGGCAGAGCCTTGTTCTCTTCTACACTCCATTGCTCGCCTATAAGGACAGCTCAATTGATATATGGAGCATGGGTAGTTTGTGGACGATTGGGGTTGTTATCCTTGTAAATGTACACCTGGCTATGGACATCAACCGTTGGGTATTGATTACTCATGCTGCTATATGGGGATCGATAATCATCACATATGGTTGCATGGTGGTAATTGATTCTATACCTGTCTTTCCCAATTACTGGACTATTTATCATATGGCAAGTTCCCCCACGTACTGGATAACAATTTTGCTTATAATAATCGTGGCATTGATCCCTCGCTTTACTTGTAAAGTTGCTAGTCAAATTTTTTGGCCTTCGGATATCCAGATAGCTAGAGAACTTGAGTTAATGAAAAGGCGACATGATCATCGAAGGTCAAGGCAACAAGCTTCCACTTAA 3843 0.4109 MSPDQPLLSQTPLPLSSSSSSSQIRYRNRSTSFSSLDDFNNNNVNIIPIHHNDVVLLLHQHQHQHQASLDFNNIINNNDNIDNACSSTRMVSFAAMELQQLHDTNNNTTSFQISSSNPNLNNTTPYHTRHKSVQFEDPILHEDSSPRLIYINDPNTTNDKYDFTGNEIRTSKYTVLTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQFGDFRSKKWKNIEVGEVVKIFADETIPADMVLLGTSDQSGLAYIQTMNLDGESNLKTRYAKQETTSAVSSEVCNVCGVIRCEPPNRNIYEFTANMEFNGVKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMMNSAISPSKRSRLETYMNRETLWLSIFLFIMCLVVAIGMCLWLVRHKDQIDTLPYYRKIYFNDGPDNGKRYKYYGIPMEAFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDGDMYDACSGSRFQCRSLNINEDLGQIRYIFSDKTGTLTENKMEFRRASVHGKNYGGSLLMADNNTAAAAVIRKRRWELKSEIAVDSELVKMLHEDSNRDARIAAHEFFLTLAACNTVIPILNGGGGFASIAASESNEDTVGIDYQGESPDEQALVSAASAYGYTLFERTSGHIVLDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPNNVVKVLVKGADTSMFSILANESETNNSIHHATEGHLSEYSSVGLRTLVIASRDLSAAELEKWQNAYEDASTSLTDRTAKLRQTASLIECNLKLLGATGIDDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLSPDMEQIIINGTSEVECRNLLDEAKAKYGVRSSYIGKKNLKQKTNADISQDSMSLSLPKWNPVKEDGITAPLALIIDGNSLVYILEKELEPELFDLATSCRVVLCCRVAPLQKAGIVDMIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKKLLLVHGHLNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSLIYTSVPTIIVGILDKDLSHKTLLKYPKLYCTGHRQEAYNMQLFWITMIDTVWQSLVLFYTPLLAYKDSSIDIWSMGSLWTIGVVILVNVHLAMDINRWVLITHAAIWGSIIITYGCMVVIDSIPVFPNYWTIYHMASSPTYWITILLIIIVALIPRFTCKVASQIFWPSDIQIARELELMKRRHDHRRSRQQAST 1280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2313 1280 SUPERFAMILY HAD-like 531 1032 IPR036412 -
Lal1g2313 1280 CDD P-type_ATPase_APLT_Dnf-like 165 1146 - -
Lal1g2313 1280 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 542 820 IPR023299 GO:0000166
Lal1g2313 1280 Pfam Phospholipid-translocating P-type ATPase C-terminal 1014 1254 IPR032630 -
Lal1g2313 1280 ProSitePatterns E1-E2 ATPases phosphorylation site. 538 544 IPR018303 -
Lal1g2313 1280 Gene3D - 222 393 - -
Lal1g2313 1280 Pfam haloacid dehalogenase-like hydrolase 532 849 - -
Lal1g2313 1280 Gene3D - 804 1026 IPR023214 -
Lal1g2313 1280 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 163 1261 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lal1g2313 1280 SUPERFAMILY Calcium ATPase, transduction domain A 247 389 IPR008250 -
Lal1g2313 1280 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 131 1278 - -
Lal1g2313 1280 PRINTS P-type cation-transporting ATPase superfamily signature 536 550 - -
Lal1g2313 1280 PRINTS P-type cation-transporting ATPase superfamily signature 986 1005 - -
Lal1g2313 1280 MobiDBLite consensus disorder prediction 1 26 - -
Lal1g2313 1280 SFLD p-type atpase 520 1036 IPR044492 -
Lal1g2313 1280 SFLD C1.7: P-type atpase like 520 1036 - -
Lal1g2313 1280 SUPERFAMILY Calcium ATPase, transmembrane domain M 164 1252 IPR023298 -
Lal1g2313 1280 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 956 1072 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal1g2313 1280 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 469 562 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal1g2313 1280 Gene3D - 641 786 IPR023299 GO:0000166
Lal1g2313 1280 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 131 1278 - -
Lal1g2313 1280 Pfam E1-E2 ATPase 249 494 - -
Lal1g2313 1280 Pfam Phospholipid-translocating ATPase N-terminal 149 214 IPR032631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2313 Lal-Chr1 25036325 25044884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2313 129 1263 Primary Pumps ATPases AT5G04930 56.305 0.0 1302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2313 K14802 - gmx:100812459 1994.93