Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2311 ATGGTTTCCTCTAGCTTTTCTGGTTTAACTTCGGCTCACATATACAAACCATTACAGAATCAGTTACTCCTTCCTGCTAGCCTTCCTAATACCATTGACACGGATAACATTGAGCTAGATTTTTCGGATGTCTTTGGTCCAGTTACTGTTCCGGCCTCGGTAGAAGTGAATAACATCGACTACTTCGCTGCAGAGTCTGTAGAAGAATCAAATGAATTGGTTTATGATGACCCCGAAGTCATTTACACTCGCTCACATTCTCTTGTTGGTCCTTCTACTTGTGTTAGTCAATCGTTGAAGCTCAGCAAACTCACCATACATGAGACTAATGACTCATTGGAACTAGTGGAGCATGTCACCAGAGAGACCATTGACGAACTGAAAGATTCTTCCTTTAAAAATGTTATCGTTGAGGATTCTTTGAATGGCGAAGATGGGAATCTCATGAAGATTCAGAGAGTTGGCATTGAAGATTTTGAGATTTTGAAGGTTGTGGGGCAGGGTTCATTTGCTAAAGTATACCAGGTGAGGAAAAAGGGTACTCCTGAGATATATGCTATGAAGGTTATGCGTAAGGACAAAATTATGGAGAAGAACCATGCTGAGTACATGAAAGCCGAGAGGGATATTTTGACCAAAATAGAGCATCCATATATTGTTCAACTCAGATACTCTTTTCAGACAAAATACCGATTGTATCTTGTGCTGGATTTTGTAAATGGGGGTCATCTCTTCTTTCAGCTTTATCACCAGGGCCTTTTCAGAGAGGAGCTAGCACGCATATATGCTGCCGAGATTGTTTCTGCAGTTTCCCATCTCCATTCGAATGGGATTATGCACAGGGATCTAAAACCTGAAAATATCCTAATGGATGCTGATGGCCATGTACTATCTCTTTACTCTGTTATGTTAACTGATTTTGGCTTAGCCAAACGATTTGAAGAGAGTACAAGATCTAATTCCATGTGTGGAACATTGGAGTACATGGCACCTGAAATTATTCTCGGCAAGGGCCACGATAAGGCTGCTGATTGGTGGAGTGTGGGCATCCTTTTGTTTGAGATGCTTACTGGAAAGCCACCATTCTGTGGTGGGAACCGTGAGAAAATTCAGCAGAAGATAGTTAAAGACAGGATAAAACTGCCGGCGTTTTTGTCTAGTGAAGCACATTCTCTCTTGAAAGGGCTGCTACAGAAGGAGGCGTGTAAGCGGTTAGGTAGTGGAACTAAGGGGATTGAGGAAATCAAAGGCCACAAATGGTTCAAACCAATCAAGTGGAATAAGTTGGATGCAAGAGAAATCCAACCAAGCTTTAGGCCCGAAGTTGGTGGGATGCATTGTGTTGCCAACTTTGAGAAGCGATGGACTGATATGCCGGTGGTGGATTCGCCGGCCACTAGTCCAAATGGTGGAAACAACCCTTTCAAGGACTTCTCATATGTGAGACCTGCACCCTCTTTTCTTCAAAGGAATAGCCCTGCTTCCTAG 1488 0.4288 MVSSSFSGLTSAHIYKPLQNQLLLPASLPNTIDTDNIELDFSDVFGPVTVPASVEVNNIDYFAAESVEESNELVYDDPEVIYTRSHSLVGPSTCVSQSLKLSKLTIHETNDSLELVEHVTRETIDELKDSSFKNVIVEDSLNGEDGNLMKIQRVGIEDFEILKVVGQGSFAKVYQVRKKGTPEIYAMKVMRKDKIMEKNHAEYMKAERDILTKIEHPYIVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREELARIYAAEIVSAVSHLHSNGIMHRDLKPENILMDADGHVLSLYSVMLTDFGLAKRFEESTRSNSMCGTLEYMAPEIILGKGHDKAADWWSVGILLFEMLTGKPPFCGGNREKIQQKIVKDRIKLPAFLSSEAHSLLKGLLQKEACKRLGSGTKGIEEIKGHKWFKPIKWNKLDAREIQPSFRPEVGGMHCVANFEKRWTDMPVVDSPATSPNGGNNPFKDFSYVRPAPSFLQRNSPAS 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2311 495 MobiDBLite consensus disorder prediction 460 495 - -
Lal1g2311 495 CDD STKc_AGC 165 421 IPR045270 GO:0004674|GO:0005524
Lal1g2311 495 ProSiteProfiles AGC-kinase C-terminal domain profile. 422 490 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lal1g2311 495 SUPERFAMILY Protein kinase-like (PK-like) 156 485 IPR011009 -
Lal1g2311 495 ProSitePatterns Protein kinases ATP-binding region signature. 165 188 IPR017441 GO:0005524
Lal1g2311 495 Gene3D Transferase(Phosphotransferase) domain 1 239 440 - -
Lal1g2311 495 Gene3D Phosphorylase Kinase; domain 1 156 463 - -
Lal1g2311 495 ProSiteProfiles Protein kinase domain profile. 159 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2311 495 PANTHER RIBOSOMAL PROTEIN S6 KINASE 1 493 - -
Lal1g2311 495 SMART serkin_6 159 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2311 495 SMART pkinase_C_6 422 482 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lal1g2311 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Lal1g2311 495 Pfam Protein kinase domain 159 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2311 495 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 1 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2311 Lal-Chr1 25021700 25026311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2311 1 492 AGC Kinase Gene Family AT3G08720 67.004 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Lal1g2311 Pkinase 4.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2311 K04688 - gmx:100804819 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g2311 1 25021700 25026311 Lal1g2311 1 25021700 25026311 ECH