Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2309 ATGAGGAACAACAACCTCAATTACTGTTCTGTTGTTACAATATTGTTATGTGTGTTCTTGTTATATATTGAGGTTGTTCTAGCAGCAGATTTTAAGCCCAAAGATAAGATTCTGCTGAGTTGTGGTGGTCCTCCATCTAGCACTGATGTTGATGGAAGAGATTGGACCACTGATATTGGTTCAAAATTTGAATCATCTTCAGCAGGAAAAACCACAACAACATCGCCGGCCGCCACTCAGGACCCTTCTGTTCCTGAGGTGCCATACATGACAGCCCGTGTGTTCCACTCAAAGTTCACCTACTCGATTCGGGTGGCCTCTGGTTGGAAATTCCTCAGGCTGTACTTTTACCCGGCTTCATACTCCGGCCTCAATGCATCAAACGCTTTGTTCAGTGTCACAGCGCAGCAATCATACACGTTGTTGAGGAATTTCAGCGTGGAACAAACCACGCTGGCCTTGAATTATGCCTACATTGTGAAGGAGTATGCGATCCATGTCGAGGGGGAAACATTGAGTGTGACTTTTACTCCATCTGCCAATGCATCGAATTCATATGCATTTGTGAATGGGATTGAGGTGGTGTCTATGCCGGATATTTATACTTCTACTAGTGATGGTAACACTATGATTGTTGCTACAAATTCTCCTTTTACAACTGATAACAGCACCATACTTGAGAATGTTTACAGGTTAAATGTCGGGGGGAATGATATCTCGCCATCTCATGATACCGGTCTTTTTAGGTCATGGTCTGATGATATGCCTTACCTATTTGGCGCTGCATTTGGAGTTACCGAGCCGGCTGATCCATCTGTGAAGATCGAGTATCCTCCAGGCACACCGAGTTATATTGCTCCAAATGATGTTTACACTACAGCCAGAACAATGGGCCCAAACCCCAAAATAAACTTAAATTACAACCTGACTTGGCTTTTCACTATCGATTCAGGGTTTTCCTATCTTGTGAGGCTCCATTTCTGTGAGGGCTCGACAAATATAACCAAGATCAATCAGAGGGTGTTTGATATTTTCCTCAATAATCAAACTGCTCAGCCTGGTGGTGCTGATGTTATAGCCTGGGCAGAGGGATCTGGGCTTTCACATAATAATGGTGTTCCGGTGCATAAAGATTATGTTGTATTTGTTCCTAATGGTGAACCACGGCAGGATTTGTGGCTTGCATTGAATCCAGATCAATCTTCGAAGCCGCAGTATTATGATGCAATCTTGAATGGAGTGGAGATATTCAAGATTAATGATAGTACTGGTAGTCTTGCTGGGACAAATCCTATTCCTCCTCCTTTGCAAGAAAAGATTGACCCTTCATTGGCTCGGCCGCATCCTCATGCCAATTCGAAGAATCATACAGGAGTGGTTGCTGGAGGTGTCGGTGGAATAGTTGTTTTATTACTGCTTATCATTGGACTATTCACTTTTGCGCGTCGCCGCAGGCATGGTACAGAGTCTAGTGCAATTGATGGTCCATCTGGCTGGCTTCCACTTTCTCTCTATGGTAATTCACATTCTGCAGGTTCTGCCAAGACTAATACCACAGGAAGTTATGCATCTTCGCTCCCATCAAACCTTTGCCGACACTTCTCATTTGCTGAAATCAAAGCTGCCACAAACAAATTTGATGATGCTTTGATTCTCGGTGTGGGGGGATTTGGTAAGGTTTACAAAGGTGAAGTCGATGGTGGAACAACCAAAGTTGCAATTAAGCGTGGAAATCCTCTATCAGACCAAGGGGTGCATGAGTTCCAAACTGAGATTGAAATGCTCTCAAAGCTTCGCCACCGTCACCTTGTTTCACTGATCGGCTACTGCGAAGAGAACACTGAGATGATTCTTGTTTATGATTACATGGCCTATGGAACACTCAGGGAGCATCTGTACAAGACTCAGAACCCACCACTGCCATGGAAGCAAAGGCTTGAGATATGCATTGGAGCCGCTCGGGGTTTGCATTATCTTCACACCGGAGCTAAACACACTATCATCCACCGCGACGTGAAGACAACAAACATTTTACTAGATGAGAAGTGGGTGGCTAAGGTCTCTGATTTCGGATTGTCCAAAACAGGTCCAACATTGAATAACACGCATGTGAGTACTGTGGTGAAGGGTAGTTTCGGTTACTTGGATCCTGAATACTTCAGGAGGCAGCAACTTACTGACAAATCTGATGTGTACTCATTTGGTGTGGTTCTGTTTGAGATATTGTGCGCACGTCCGGCTCTGAATCCAACACTTGCTAAGGAGCAAGTGAGTCTAGCTGAGTGGGCGCCGCATTGTTATAAAAAGGGGATTCTTGATCAATTCATGGATCCATATCTCAAGGGAAAGATAGCTCCAGAATGCTTTAAGAAATTTGCTGAGACAGCGATGAAGTGTGTATCCGACCAAGGTATAGAGAGGCCTTCCATGGGTGATGTACTGTGGAACCTTGAGTTTGCATTGCAGCTGCAAGAAAGTGCTGAGGAGAGTGGCAAGGATTTTGTTGGGAAAATGGTTCTGAATGAAGAAGAGTCATTGTTTAGTGGCAATGATTGTAAAGAGAAGAACACTGATGCAAGTAATGTGAGTGATTCAAGAAGCAGTGGAATGAGTATGAGCATTGGTGGTAGAAGCTTGGTAAGTGAAGATTCAGATGGATTGACACCTAGTACTGTGTTTTCTCAGATCATGAATCCAAAAGGACGTTAA 2709 0.4408 MRNNNLNYCSVVTILLCVFLLYIEVVLAADFKPKDKILLSCGGPPSSTDVDGRDWTTDIGSKFESSSAGKTTTTSPAATQDPSVPEVPYMTARVFHSKFTYSIRVASGWKFLRLYFYPASYSGLNASNALFSVTAQQSYTLLRNFSVEQTTLALNYAYIVKEYAIHVEGETLSVTFTPSANASNSYAFVNGIEVVSMPDIYTSTSDGNTMIVATNSPFTTDNSTILENVYRLNVGGNDISPSHDTGLFRSWSDDMPYLFGAAFGVTEPADPSVKIEYPPGTPSYIAPNDVYTTARTMGPNPKINLNYNLTWLFTIDSGFSYLVRLHFCEGSTNITKINQRVFDIFLNNQTAQPGGADVIAWAEGSGLSHNNGVPVHKDYVVFVPNGEPRQDLWLALNPDQSSKPQYYDAILNGVEIFKINDSTGSLAGTNPIPPPLQEKIDPSLARPHPHANSKNHTGVVAGGVGGIVVLLLLIIGLFTFARRRRHGTESSAIDGPSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNKFDDALILGVGGFGKVYKGEVDGGTTKVAIKRGNPLSDQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDYMAYGTLREHLYKTQNPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLNNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPTLAKEQVSLAEWAPHCYKKGILDQFMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGKDFVGKMVLNEEESLFSGNDCKEKNTDASNVSDSRSSGMSMSIGGRSLVSEDSDGLTPSTVFSQIMNPKGR 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2309 902 MobiDBLite consensus disorder prediction 59 82 - -
Lal1g2309 902 Gene3D Phosphorylase Kinase; domain 1 508 622 - -
Lal1g2309 902 ProSitePatterns Serine/Threonine protein kinases active-site signature. 667 679 IPR008271 GO:0004672|GO:0006468
Lal1g2309 902 Pfam Malectin-like domain 39 419 IPR024788 -
Lal1g2309 902 SUPERFAMILY Protein kinase-like (PK-like) 521 819 IPR011009 -
Lal1g2309 902 PANTHER - 22 838 - -
Lal1g2309 902 ProSiteProfiles Protein kinase domain profile. 546 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2309 902 PANTHER OS07G0166700 PROTEIN 22 838 IPR045272 GO:0004714|GO:0006468
Lal1g2309 902 ProSitePatterns Protein kinases ATP-binding region signature. 552 575 IPR017441 GO:0005524
Lal1g2309 902 Pfam Protein tyrosine and serine/threonine kinase 552 814 IPR001245 GO:0004672|GO:0006468
Lal1g2309 902 MobiDBLite consensus disorder prediction 59 81 - -
Lal1g2309 902 MobiDBLite consensus disorder prediction 849 902 - -
Lal1g2309 902 SMART serkin_6 546 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2309 902 Gene3D - 226 420 - -
Lal1g2309 902 Gene3D - 37 198 - -
Lal1g2309 902 CDD STKc_IRAK 552 818 - -
Lal1g2309 902 Gene3D Transferase(Phosphotransferase) domain 1 623 842 - -
Lal1g2309 902 MobiDBLite consensus disorder prediction 852 902 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2309 Lal-Chr1 25010693 25013401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2309 25 902 Receptor kinase-like Gene Family AT3G51550 72.768 0.0 1291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal1g2309 Malectin_like 4.1e-40 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2309 - - lang:109325091 1707.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1721 9 19436854 19439565 Lal1g2309 1 25010693 25013401 LSH