Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2306 ATGTCAGAAATAGGGGTAGTAAAAAGATACTGCTACAATGAGTTACTTCCATTTGGGGTCATGGTGACAATGGAATCCATTAATGTGGCCTTAAACACTTTGTTCAAAGCTGCTACTTTAAGAGGAATGAGCTACCATGTTTTTATTGTTTATGCTTATTCTGTTGCTACTATTGTGCTCCTTCCTGCACCATTTATCTCTACCAGATCAAGAGTGCTTCCTCCCCTCAGTTACCCAATACTTTGTAGAATTGGTCTTCTTGGGCTTATAGGATGTTCATCTAATGTAGTGGGTTACACAGGCATTAGCCTAAGTTCTCCCACTCTTTCCTCAGCTATCAGCAACTTGGTGCCAGCTTTTACCTTCTTGCTTGCCATCATTTTCAGGATGGAAAAGGTAACTAAAAGTGCAAGTAGTAAAGCCAAAATCATAGGTACCATAGTATCAATATCTGGAGCATTTGCAGTGACCCTTTACAAAGGACCAACTATTATAGGTCATACACCTTCCATTTCACTTCATAAATCAATTAACACTCTCAATTCAGAGGACCAAAATTGGATCATTGGTGGTCTTCTACTAACAACTGAGTATACACTTATTCCATTATGGTACATTGTTCAGGTGCAAATCATGAAGGTGTATCCTAATGAACTAACTGTAATCTTCTTTTACAACTTATGTGTAAGCATTTTGGCAGCAATTGTAGCTCTATTTACAGAGAAAAATCCAAGTGCATGGAAAATAGGACTAGATACATCATTGGCTTCCATCATTTGCTCAGGAATTTTTGGGTCGTTCTTGAACAATGCAGTTCACACATGGGTATTACGCATTAAAGGGCCTGTCTATGTAGCAATGTTCAAGCCACTCTCAATTGTTATAGCTGTTACCTTGGGAGTCATATTCCTTGGTGATTCTCTCCACGTTGGAAGTGTGGTTGGAGCCATAATAATATCAATAGGGTTTTACACTGTGATGTGGGGTAAAGCAAAAGAAGAGGTGAAAGAAGATGTTGGAAGCCAGGAACTACCAACTACTGAGAATGTTCCACTCTTACAAAGCCATAAAACTGAAAAGAACATGCATGGACATGAGTACAAGTGTTTGTAA 1113 0.3881 MSEIGVVKRYCYNELLPFGVMVTMESINVALNTLFKAATLRGMSYHVFIVYAYSVATIVLLPAPFISTRSRVLPPLSYPILCRIGLLGLIGCSSNVVGYTGISLSSPTLSSAISNLVPAFTFLLAIIFRMEKVTKSASSKAKIIGTIVSISGAFAVTLYKGPTIIGHTPSISLHKSINTLNSEDQNWIIGGLLLTTEYTLIPLWYIVQVQIMKVYPNELTVIFFYNLCVSILAAIVALFTEKNPSAWKIGLDTSLASIICSGIFGSFLNNAVHTWVLRIKGPVYVAMFKPLSIVIAVTLGVIFLGDSLHVGSVVGAIIISIGFYTVMWGKAKEEVKEDVGSQELPTTENVPLLQSHKTEKNMHGHEYKCL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2306 370 Pfam EamA-like transporter family 205 327 IPR000620 GO:0016020|GO:0016021
Lal1g2306 370 Pfam EamA-like transporter family 29 157 IPR000620 GO:0016020|GO:0016021
Lal1g2306 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 331 - -
Lal1g2306 370 PANTHER WAT1-RELATED PROTEIN 14 349 IPR030184 GO:0016021|GO:0022857
Lal1g2306 370 PANTHER WAT1-RELATED PROTEIN 14 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2306 Lal-Chr1 24977274 24982230 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2306 6 362 Nodulin-like Gene Family AT3G28050 55.914 1.61e-139 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2306 - - gmx:100801438 539.65