Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2303 ATGTCAAATACAATTAATCCAGCCATGTATAAGGGGAGATTTGAAGGGTGCAGTGGTGATGGAGTTAAGTCTCAGCTTAGATATGTCGAAACTGATCCATCTGGTCGATATGGCCGTTTTAGGGAAGTTCTAGGTAGAGGAGCTACAAAGACAGTGTATAAGGCATTTGATGAGGTATTAGGAATTGAAGTAGCTTGGAATCAAGTTCATCTTGGTAATGTTTCTCATTCACCAGAACAACTTCAACGTCTTTATTCAGAAGTTCATCTCCTGAAGCACCTTGATCATGAATCTATGATGATCTTCTATGGTTCTTGGATTGATATCATTTGTAAAACCTTCAACTTCATTACTGAATTGTTCACCTCTGGCACCCTTAGAGAGTATAGGCAAAAGTATAAGCGAGTAGATATTAGAGCATTGAAGAATTGGTCTCGTCAGATTCTAAGTGGTTTGGAGTATTTACACAACAATGATCCACTTATAATACATAGAGACCTAAAGTGTGATAATATCTTTGTAAATGGCCATCTTGGGCAAGTTAAGATTGGTGACTTAGGCTTGGCAGCTATACTTCGTAGCTCCCCACTTGCCCAAAGTGTCATAGGTACACCAGAGTTCATGGCACCAGAGTTATATGAAGAAAAATACAATGAGCTTGTAGATATATACTCATTTGGGATGTGTATGATTGAGATGCTTACTTTTGAGTTCCCATATAGTGAGTGTTCCAACCCAGCTCAAATTTACAAGAAAGTTACTTCGGGGAAGCTACCAGATGCATTTTACAGAATAAATGACATAGAAGCCCATAATTTCGTGGGAAAATGTTTGGCAAATGTCTCAAAGAGGCCCTCAGCAAAGGAGCTTTTGATGGATCCATTTTTAGCCACTGACCAATTTCAGTTATCATTACTAAACCAACCATTATCCACAAATCAAATTATGATCCTTAATTCCAATGATTCTGTTAATATTTCATTGGATAATAAAAAAATGAGCACAGATATGATGACAATCACTGGGTCCATAAATAAAGAGGACAACACATTGTTCCTTAAAGTTCGGATATCCGACAAAAATGGGTATACAAGAAATGTATTCTTTCCATTTGACACAATACAAGACACTCCTATTGAGGTAGCCATGGAGATGGTTAAAGAACTTTCTATTAGCCACTTGGAACCTTCTGAGATTGCTTCAATGATAGATCATGAAATATCAACTCTAGTTTCAACTTGGAGGGGTAGGAGTACTAATCATCACAATCACCTACAACATAGCTTTAACTATAAAGAATATGAGGATATTAATAACCATCATCCTTTCTTCTTTTCATCTTCTTCTTCTTCCCCTCATGCTTCAATCTCTTTCCCCATGTCTAATTCCTTCTACAAGAACCATTTTTGTGGCCACAATTACCCATTTCCTCAAGAATGGGCTCAAGATGATCTATTTATGAATGAAGATACAAGTTGTCTAAGCACAATAAACTCCTTGGAGTGTATCAATTTCAAATCCTTCAATGAAGATGAGCATGGCCTATCATTAGCACTAGATGGAGAAGCTGAACACAACAAGTGCACAAGATCATTAACCAAACAATTTTGTAACAGAAGAATAACGAACCTTTGTAGTTGCAAATGTGGTGGGTCATCAAAGCAGTTTCAACAGTCTCTAATATGCAACAGAAGGATGTTAAACATGGTTGGGGCCATTAAGAACATTGGGTTCAATCATCCACAAAGAGATTGA 1755 0.3721 MSNTINPAMYKGRFEGCSGDGVKSQLRYVETDPSGRYGRFREVLGRGATKTVYKAFDEVLGIEVAWNQVHLGNVSHSPEQLQRLYSEVHLLKHLDHESMMIFYGSWIDIICKTFNFITELFTSGTLREYRQKYKRVDIRALKNWSRQILSGLEYLHNNDPLIIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRSSPLAQSVIGTPEFMAPELYEEKYNELVDIYSFGMCMIEMLTFEFPYSECSNPAQIYKKVTSGKLPDAFYRINDIEAHNFVGKCLANVSKRPSAKELLMDPFLATDQFQLSLLNQPLSTNQIMILNSNDSVNISLDNKKMSTDMMTITGSINKEDNTLFLKVRISDKNGYTRNVFFPFDTIQDTPIEVAMEMVKELSISHLEPSEIASMIDHEISTLVSTWRGRSTNHHNHLQHSFNYKEYEDINNHHPFFFSSSSSSPHASISFPMSNSFYKNHFCGHNYPFPQEWAQDDLFMNEDTSCLSTINSLECINFKSFNEDEHGLSLALDGEAEHNKCTRSLTKQFCNRRITNLCSCKCGGSSKQFQQSLICNRRMLNMVGAIKNIGFNHPQRD 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2303 584 Gene3D Phosphorylase Kinase; domain 1 22 119 - -
Lal1g2303 584 ProSiteProfiles Protein kinase domain profile. 38 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2303 584 PANTHER WNK KINASE 3 551 - -
Lal1g2303 584 SUPERFAMILY Protein kinase-like (PK-like) 40 297 IPR011009 -
Lal1g2303 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Lal1g2303 584 Gene3D Transferase(Phosphotransferase) domain 1 121 303 - -
Lal1g2303 584 CDD STKc_WNK 36 296 - -
Lal1g2303 584 Pfam Protein kinase domain 42 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2303 584 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 3 551 - -
Lal1g2303 584 SMART serkin_6 38 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2303 Lal-Chr1 24958527 24962207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2303 26 436 MAP Kinase Kinase Kinase AT3G51630 65.459 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lal1g2303 Pkinase 2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2303 K08867 - gmx:100272206 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g2303 1 24958527 24962207 Lal1g2303 1 24958527 24962207 ECH