Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2302 ATGGGCAACAATTATAGGTTCAAGTTATCACATATGATTCCCAATGCTTGGTTCTATAAGCTCAAAGACATGGCAAAACCAAGAACACAAACCTCAACAACATCAACAACAACAACAACATCAACATCTCAGTCCAGAAAGAATAAACAATCTTTTTCTACATCAACCTCTTCAATCAAACATTCATCAAAGCCAAACCAACCTCACCAATACTACAATCCTAGAAAGTCTTACTATTTTACAAGGGACCTTAACCTCAACACTTCACCACCAAATAACCAAAAACTCTTACACACCAATTTCCATGAACCACCAACAAAATCAACCAAGCAAAGAGCCAAGAAAAGAACTTCAAAAACTTCAAATTCACCTAAGCATTCATATTCATCAACTCCACTTGAATTAGAGTTCCATGATACAGATTTCAGAACAGACAGTGTTCTTCTTCCAACTGATGAGTCATTATTATTATTTGATGAAATGGTTTCATTGTCAAACAATTACTCTTCTTATGGCTGCAGGGTACTAAATGATGATATCGTTATAGATGTTGAAAACAACTCTGTATCAAGACAAAATGATAAGGTAGAAAGAGGGTATAATGATTCATTTTCTGACCATGTTCTACCACCAATTGTAACCAAGCCAAGAACTAGATTCAATGATTTTCTTGGTGATGATGCAAAGAACAAGAACAAGAAAAAAACCAAACAAAAAAGTAGATTGGTCGCTGACGTGGACGTCCAATTAGGATTGATGACTTTGGATCCATCTAATGACTCAAGTTGCGTAAAATCATCGAATGTGGTGAATGTGTATAAATCTGACGTTAGGGAATCCGAGTCGATTAAAGGGTCTCTCAGAAATAAAATTGTGAATGAAGAAAATGCATCGATTAAAGAAGTGAGTAATAGTCCTAGTGTTGGTGGTGGCAGGAGATTGAGGGTTAGGATTAATTCACCTAGAGTAAGAAGCCGGAAAAGTGTGTCATCGGCGGCGGCAGGCGGCCGGAGAAGCCTTTCAGATAGCTTTGCAATAGTGAAGTCATCATTGAATCCACAGAGGGATTTTAGAGAGTCAATGATGGAAATGATTGAGAAGAACAATATAAGGAGTTCAAAGGATTTGGAAGATCTTCTAGCTTGTTACCTTTCTCTTAATTCAGATGAGTATCATGATCTCATTATCAAAGTGTTCAAGCAAATTTGGTTTCATTTGTTTTATAATTAG 1230 0.3642 MGNNYRFKLSHMIPNAWFYKLKDMAKPRTQTSTTSTTTTTSTSQSRKNKQSFSTSTSSIKHSSKPNQPHQYYNPRKSYYFTRDLNLNTSPPNNQKLLHTNFHEPPTKSTKQRAKKRTSKTSNSPKHSYSSTPLELEFHDTDFRTDSVLLPTDESLLLFDEMVSLSNNYSSYGCRVLNDDIVIDVENNSVSRQNDKVERGYNDSFSDHVLPPIVTKPRTRFNDFLGDDAKNKNKKKTKQKSRLVADVDVQLGLMTLDPSNDSSCVKSSNVVNVYKSDVRESESIKGSLRNKIVNEENASIKEVSNSPSVGGGRRLRVRINSPRVRSRKSVSSAAAGGRRSLSDSFAIVKSSLNPQRDFRESMMEMIEKNNIRSSKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFHLFYN 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2302 409 Pfam DNA-binding domain 1 45 IPR025830 GO:0003677
Lal1g2302 409 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 314 407 - -
Lal1g2302 409 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 4 241 - -
Lal1g2302 409 Pfam Transcriptional repressor, ovate 350 407 IPR006458 -
Lal1g2302 409 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 345 407 IPR006458 -
Lal1g2302 409 MobiDBLite consensus disorder prediction 26 104 - -
Lal1g2302 409 ProSiteProfiles OVATE domain profile. 346 405 IPR006458 -
Lal1g2302 409 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 314 407 IPR038933 GO:0045892
Lal1g2302 409 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 4 241 IPR038933 GO:0045892
Lal1g2302 409 MobiDBLite consensus disorder prediction 26 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2302 Lal-Chr1 24947316 24948545 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lal1g2302 Ovate 4.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2302 - - lang:109359570 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g2302 1 24947316 24948545 Lal1g2302 1 24947316 24948545 ECH
Lal1g2302 1 24947316 24948545 Lal14g0806 14 10073763 10074923 PCT
Lal1g2302 1 24947316 24948545 Lal19g0300 19 3103857 3104987 PCT
Lal14g0806 14 10073763 10074923 Lal1g2302 1 24947316 24948545 PCT
Lal19g0300 19 3103857 3104987 Lal1g2302 1 24947316 24948545 PCT