Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2298 ATGACATATTTCAAGGCCTTACCCATAATCACTAATCATAAGCTAGTTATAAATCTTAGTATTCTTCTTCTTCCAATTCCCATTACCATGGCTACTTATTCTTTCTTTATTAAGCTTCAAATATTGTTATGCCTTATTGGGATAGTCTCAGCTCAATTATCAACTGATTTTTACTCCACAACATGCCCTAATGTTCTTTCAACCATTAAAACAGCTATTGACTCTGCTGTCACCAATGAGGCTCGCATGGGGGCATCATTGCTTCGTCTCCATTTCCATGATTGCTTTGGTTGTGATGCATCAGTGCTATTAGATGATAATGCTACATCAAATTTTCGTGGTGAAAAGAATGCATTTGGAAATGCTGATTCTTTAAGAGGTTTTGATGTAATAGACACCATAAAGACTCAAGTTGAGAACTTGTGTCCTGGTGTTGTATCTTGTGCTGATATCCTCACTGTTGCTGCAAGAGACTCAGTTGTTGCTCTTAATGGACCTAGTTGGACAGTGCAATTGGGAAGAAGAGACTCAACAACTGCAAGTTTTACTCTTGCAAATTCAGATTTGCCTGCTCCAACTTTGAATCTAAGTAATCTTATCATTGCTTTCTCCAACAAA 618 0.3738 MTYFKALPIITNHKLVINLSILLLPIPITMATYSFFIKLQILLCLIGIVSAQLSTDFYSTTCPNVLSTIKTAIDSAVTNEARMGASLLRLHFHDCFGCDASVLLDDNATSNFRGEKNAFGNADSLRGFDVIDTIKTQVENLCPGVVSCADILTVAARDSVVALNGPSWTVQLGRRDSTTASFTLANSDLPAPTLNLSNLIIAFSNK 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2298 206 PANTHER PEROXIDASE 45 206 - -
Lal1g2298 206 Pfam Peroxidase 70 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal1g2298 206 PANTHER PEROXIDASE 72-RELATED 45 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal1g2298 206 ProSitePatterns Peroxidases active site signature. 84 95 IPR019794 GO:0004601
Lal1g2298 206 SUPERFAMILY Heme-dependent peroxidases 52 205 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal1g2298 206 Gene3D - 53 201 - -
Lal1g2298 206 PRINTS Haem peroxidase superfamily signature 84 98 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal1g2298 206 PRINTS Haem peroxidase superfamily signature 146 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal1g2298 206 PRINTS Haem peroxidase superfamily signature 164 176 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal1g2298 206 PRINTS Plant peroxidase signature 62 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal1g2298 206 PRINTS Plant peroxidase signature 86 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal1g2298 206 PRINTS Plant peroxidase signature 126 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal1g2298 206 PRINTS Plant peroxidase signature 145 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal1g2298 206 PRINTS Plant peroxidase signature 164 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal1g2298 206 ProSiteProfiles Plant heme peroxidase family profile. 52 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2298 Lal-Chr1 24900085 24901916 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2298 48 204 Peroxidase AT5G05340 66.667 6.25e-71 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2298 K00430 - csin:114318212 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1957 2 21841376 21842613 Lal1g2298 1 24900085 24901916 LSH