Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2275 GTTGAAGATATGGGAGGGTGCTGTAGCCATGGTGCTACTGTTAGAGGAAAGGTGGAAAGCGAAGTGGATGGTGAAGAATATGAGCATGATCATAGCACTCATGTCAGATATGAACATGATGGATCAAGGGTCATATTAAAAGGATCCTCTATGTTTGTATCATTGGATTGCCAACAAGGTAAGAAAGGTGTTAATCAAGATGCATTGACAGTTTGGGAGGATTTCACTGGAGAAAAAGATATGATCTTTTGTGGTGTATTCGATGGACATGGTCCTCTAGGCCACAAGGTTTCACAATTCATTCGAGACAAGCTACCCTTAAAACTGTCTGAATCAATCAAAATGGCACAACAAAATGCTTGCAGATTTTATGATGCTAAGGAATCAGCAAGTGGAAGTTATGATGATATCTATGAAGGAAATAACCAAGGCATGTCCCTTGCTGCATGGGAAGCATGCTTTCTCAAGTCCTTTGATGAAATTGATGAAAAACTTGCTCAAGAGATTAATACTGATAGCTATTGCAGTGGTAGTACTGCTGTAACTGTGATTAAACAGGGTGACCAGTTGATAGTCGGGAATTTGGGCGATTCTCGAGCAGTTCTTTGCACAAGAGGGGATATAAACCAACTTATTCCGGTTCAACTTACTGTTGACTTGAAACCTGATATTCCAAGCGAAGCTTCAAGAATCATTACCTGCGAAGGTAGAGTTTTCGCATCGAAAGAGGAACCGGATGTGTACAGAATATGGATGCCTGATGATGACTGTCCTGGACTAGCTATGTCAAGAGGCTTTGGAGACTTTTGCATTAAAGATTATGGCCTCATTTCAACTCCTGATGTCTTTTATAGAAAACTTACTAAGCAAGATGAATTTGTGATTTTGGCAACTGACGGGGTATGGGATGTGCTGACTAACAGTGAAGTAATAAACATAGTTGCTTCAGCACCAAGGAAATCCATAGCAGCAAAAATGTTAGTTAACCACGCGGTAGGAGCGTGGAGGTACAAATATCCCGGTTTCATGGTTGATGATTGTGCAGCCATATGCTTGTTTCTGAATGATCAGCCTGTGTTATCCCAATCCAAATCCAATAGGAGCATAAGCCATGAAATCCATAGAAATCGCAGCAAGAACCTATTTCGCCAATTTAAATCGACTAGAAATGAAGAAACTGAAAGAGTTGATGGCAAAGTTGGTTTAGAACTTGATGAAGAATGGAAAGCTCTTGGAGGATTTGTTAGATCTAACTCAATATCAAAACTTCCATGGTTTGCTAAGAATTTGAGTGAACGGCAAGCATTGAAGTACTATAAGGGGGGTTAG 1329 0.4033 VEDMGGCCSHGATVRGKVESEVDGEEYEHDHSTHVRYEHDGSRVILKGSSMFVSLDCQQGKKGVNQDALTVWEDFTGEKDMIFCGVFDGHGPLGHKVSQFIRDKLPLKLSESIKMAQQNACRFYDAKESASGSYDDIYEGNNQGMSLAAWEACFLKSFDEIDEKLAQEINTDSYCSGSTAVTVIKQGDQLIVGNLGDSRAVLCTRGDINQLIPVQLTVDLKPDIPSEASRIITCEGRVFASKEEPDVYRIWMPDDDCPGLAMSRGFGDFCIKDYGLISTPDVFYRKLTKQDEFVILATDGVWDVLTNSEVINIVASAPRKSIAAKMLVNHAVGAWRYKYPGFMVDDCAAICLFLNDQPVLSQSKSNRSISHEIHRNRSKNLFRQFKSTRNEETERVDGKVGLELDEEWKALGGFVRSNSISKLPWFAKNLSERQALKYYKGG 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2275 442 CDD PP2Cc 51 354 IPR001932 -
Lal1g2275 442 ProSiteProfiles PPM-type phosphatase domain profile. 52 354 IPR001932 -
Lal1g2275 442 PANTHER ALPHABET, ISOFORM E-RELATED 4 417 - -
Lal1g2275 442 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 4 417 - -
Lal1g2275 442 SUPERFAMILY PP2C-like 44 356 IPR036457 -
Lal1g2275 442 Pfam Protein phosphatase 2C 76 334 IPR001932 -
Lal1g2275 442 Gene3D - 42 356 IPR036457 -
Lal1g2275 442 SMART PP2C_4 42 352 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2275 Lal-Chr1 24692910 24696018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2275 4 380 PP2C-type Phosphatase Gene Family AT5G01700 49.471 2.43e-126 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2275 - - gmx:100783603 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g2275 1 24692910 24696018 Lal1g2275 1 24692910 24696018 ECH
Lal2g1946 2 21719604 21722760 Lal1g2275 1 24692910 24696018 LSH
Lal9g1702 9 19275789 19279850 Lal1g2275 1 24692910 24696018 LSH