Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2256 ATGGGCAACAATATTTGGTATATGAATGATTTTTTCAGATACCCTTTTCATATTTTGGTCTCTTGTTTTAATGCACTTACTCAATGTTGTTATATAGGTGAATCTAGAAGGGAAAAATGCAGTTTCATGTACTTTGCATTGTTCTTCATGTTTTTGCAAGTTCTGGCTACTTGTACTTTTGTCACAGGACACCAACTGTTTGATGGTGTGGTTGTGAGAAAATCAGATTATGAAGCACTAAGGGCATTGAAGCATGAGTTTATTGACTTCAAAGGGGTTCTAAGAAGCTGGAATGATAGTGGTTTTGGAGCATGTTCAGGTTCATGGGTAGGTATCAAATGTGTTAATGGAGAGGTTATTGCTATTCAGCTTCCTTTTAAAGGGTTAGGTGGAAAAATCTCTGAGAAAATTGGGCAATTTCAATCTTTAAGGAAGATTAGTCTTCATGATAATCTTCTAATTGGTCCTATCCCTTATTCTCTTGGTTTTCTTCCTAATCTTAGAGGTGTTTATCTATTTAATAACAAGCTTTCAGGTTCTATTCCTCTTTCTATTGGTAATTGTCCAATGCTTCAATCAATTGATGTTAGTAATAACTTGCTTATTGGTAAAATCCCTCCTAGTTTATCAAACTCCATTAGGATATTTAGGATCAATTTGAGTTTTAATTTGCTTTCTGGATCCATTCCTAGTAGTCTTACTATGTCTCATTCTCTTACTATTCTTGCATTACAATACAACAATCTTTCTGGTTCTATACCAGATTCTTGGGGTGGAATGGGAAACAATAACAAGGGTTTTGTTTCTTCCAAACTTCAGGTTTTGACACTTGATCATAATCTCATTTCTGGTACTATTCCAGTTTCTATAAGCAAGTTGAGTTTGGTTGAAAACATTTCTTTAAATCATAACCAGATTATAGGGTCTATACCAAGTGAAATAAGTGCACTTTCAAGGCTTAGATTTCTTGATATATCAAACAATTCCATTAATGGTAGCATCCCTAAGACCTTCTCCAACCTCACTTCTATTGTTTCATTGAACTTAGAAGGAAACCAGCTTGAAAATCATGTACCAGATAGTTTGGAAACCTTGCAAAACCTTTCTATGCTTAACCTCAAGAACAATAAGTTTGACGGTCAAATCCCTTCAACAATAGGGAACATCACAGGCATCACCAAAATTGATCTCTCCGAAAATAATCTTGTTGGAGAAATTCCTGATTCTTTTGCCAAACTTGCAAATTTGAGTTTTTTCAATGTTTCTTACAACAATCTTTCTGGTCCTGTTCCTTCCCTCCTTACCAAAAGATTCAAGTCAAGTTCCTTTACAGGGAACCTTCAATTATGTGGATTTATTGCCTCAAAACCATGCTCCTCACCACCACCCGAGGCTCTTCCGGCTCCATCAAAAAATCCCTCTTCAAAGTCACACCATCTTAATCAATTAAGCACCAAGAGCATACTCCTAATAGTAGCAGGTGTTATCCTCATAATTCTGTTATTCCTGTGCTGCTTTTTGTTGTGTTGTTTGGTTAAGAAAAGGGGTTGTTCAGAAAGAAAGAATGGTAAGGCAAAAGCAGCAGCAGCTTCTGCAAGAAGTATTAAGAAAGGTGGTGGTGGTGGTGGTGGAATTGAATCACCAGGAGGTGAAGTTGGTGGGAAGCTAGTTCACTTTGATGGACCATTTGTTTTTACAGCTGATGATCTTCTATGTGCAACTGCTGAGATAATGGAGAAAAGTCCATATGGAACATCATATAAGGCAACATTGGAGGATGGGAACCAAGTTGTTGTGAAGAGGCTGAGAGAGAAGACTACTAAAGGGAAGAAGGAGTTTGAAACTGAAGCTGCTTCACTTAGCAAAATCAGACATCAAAATCTCTTGGCACTTAGAGCCTATTATTTAGGACCAAAAGGAGAAAAGCTTCTTGTCTTTGATTATATGCCCAAAGGAAGCTTAGCATCATTCCTTCATGATAGAGGGGATGAAACTGTGATTGAGTGGCCAACAAGGATGAACATAGCAATTGGAATCACACTTGGTTTGTACCATCTCCATAAGGAAGAGAACATAGTACATGGAAATCTTACCTCTAGCAATATACTATTAGATGAGCAAACAAATGCTCACATTACAGATTTTGGACATTCAAGGTTAGTCACAACTTCTGCCAGAAGTAACATCATTGCTACTTCAGGAAATGCTGGTTATAATCCACCTGAGCTTTCAATAACTAAGAAGCCTAATCAAAAGACTGATGTTTATAGCCTTGGTGTCATCATTTTGGAACTCCTAACTGGTAAACCACCGGGTGAGACAAGCAATGGTATGGAATTGCCTCAATGGGTGGCATCTATAGTAAAAGAAGAGTGGACAAATGAAGTATTTGATTTGGAACTTATGAGGGATGCATCAGATATAAGTGATGAACTTCTTAATACATTGAAATTAGCTCTTCATTGTGTGGATCCTTCTCCATCAGCAAGACCAGAGGTTCACCAAGTTCTTCACCAATTGGAGGAAATCAATAACTGA 2538 0.3731 MGNNIWYMNDFFRYPFHILVSCFNALTQCCYIGESRREKCSFMYFALFFMFLQVLATCTFVTGHQLFDGVVVRKSDYEALRALKHEFIDFKGVLRSWNDSGFGACSGSWVGIKCVNGEVIAIQLPFKGLGGKISEKIGQFQSLRKISLHDNLLIGPIPYSLGFLPNLRGVYLFNNKLSGSIPLSIGNCPMLQSIDVSNNLLIGKIPPSLSNSIRIFRINLSFNLLSGSIPSSLTMSHSLTILALQYNNLSGSIPDSWGGMGNNNKGFVSSKLQVLTLDHNLISGTIPVSISKLSLVENISLNHNQIIGSIPSEISALSRLRFLDISNNSINGSIPKTFSNLTSIVSLNLEGNQLENHVPDSLETLQNLSMLNLKNNKFDGQIPSTIGNITGITKIDLSENNLVGEIPDSFAKLANLSFFNVSYNNLSGPVPSLLTKRFKSSSFTGNLQLCGFIASKPCSSPPPEALPAPSKNPSSKSHHLNQLSTKSILLIVAGVILIILLFLCCFLLCCLVKKRGCSERKNGKAKAAAASARSIKKGGGGGGGIESPGGEVGGKLVHFDGPFVFTADDLLCATAEIMEKSPYGTSYKATLEDGNQVVVKRLREKTTKGKKEFETEAASLSKIRHQNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHDRGDETVIEWPTRMNIAIGITLGLYHLHKEENIVHGNLTSSNILLDEQTNAHITDFGHSRLVTTSARSNIIATSGNAGYNPPELSITKKPNQKTDVYSLGVIILELLTGKPPGETSNGMELPQWVASIVKEEWTNEVFDLELMRDASDISDELLNTLKLALHCVDPSPSARPEVHQVLHQLEEINN 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2256 845 Pfam Leucine Rich Repeat 191 211 IPR001611 GO:0005515
Lal1g2256 845 Gene3D Ribonuclease Inhibitor 72 265 IPR032675 -
Lal1g2256 845 Pfam Leucine rich repeat N-terminal domain 74 114 IPR013210 -
Lal1g2256 845 Gene3D Ribonuclease Inhibitor 266 462 IPR032675 -
Lal1g2256 845 SUPERFAMILY Protein kinase-like (PK-like) 579 842 IPR011009 -
Lal1g2256 845 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 36 844 - -
Lal1g2256 845 SUPERFAMILY L domain-like 99 450 - -
Lal1g2256 845 Pfam Leucine rich repeat 319 378 IPR001611 GO:0005515
Lal1g2256 845 Gene3D Phosphorylase Kinase; domain 1 579 649 - -
Lal1g2256 845 Pfam Protein kinase domain 583 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2256 845 Gene3D Transferase(Phosphotransferase) domain 1 650 845 - -
Lal1g2256 845 CDD STKc_IRAK 580 843 - -
Lal1g2256 845 ProSiteProfiles Protein kinase domain profile. 572 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2256 845 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 36 844 - -
Lal1g2256 845 Coils Coil 837 845 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2256 Lal-Chr1 24524997 24529167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2256 67 843 Receptor kinase-like Gene Family AT3G51740 63.729 0.0 957
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal1g2256 Pkinase 8.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2256 - - gmx:100819102 1142.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g2256 1 24524997 24529167 Lal1g2256 1 24524997 24529167 ECH