Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2232 ATGAGTGATTCAAATGTTGCATCATCTTTTGAGGAATTTTTCCATGGATGGTTGATGAGACAAAGATTCCACCTTGATGAGCTTGTCTCAGCTCAACAACAACTACTACCAGATGGTGATAGCATCAGAGGATTGATAAACAGGGTACTCTGTCACTATGGACAATACTATGAAGAGAAATCAAAGGTTACCCAAAACAATATCATCCTAGTTTTTTCACCACCATGGTTCACTTCATTGGAAAGAATGTTTCTTTGGGTTGGAGGGTTTAAGCCTGGGATGGCATTTGAGGTTGTGAACACAGCTTTAGAGGATGAACTATCTGAAGAGCAGAAGCATAGGTTGAGTCAAATCCAACAACAGACAAAGTTCAAGGAAAGGGAACTCAATGATGAATTGGCTAAGGTTCATGAGAGTGTGGCGGCGCCACCACTTGTGGAGATGGCAAGAAGCCATGGCAAGATGTGTTTAGGAGGTGCAACCTTGGATTCTCAATCCAATATATCTGTTCCAAGCACTTTGAAGGTGACACTGGAGAATCTGGTTATAAGGGCTGATAGTTTGAGGAGAAATACAGCATTGAAAGTTGTGCAAGTATTGAAACCAGCACAGGCTGTTACATTCTTTGCTGCTGTGGCTGAGCTTCAGCTTAGGGTCAGGGCCTGGGGTTTGGAGAAGGATGGTTTAAGTGGAGGCTAA 699 0.4292 MSDSNVASSFEEFFHGWLMRQRFHLDELVSAQQQLLPDGDSIRGLINRVLCHYGQYYEEKSKVTQNNIILVFSPPWFTSLERMFLWVGGFKPGMAFEVVNTALEDELSEEQKHRLSQIQQQTKFKERELNDELAKVHESVAAPPLVEMARSHGKMCLGGATLDSQSNISVPSTLKVTLENLVIRADSLRRNTALKVVQVLKPAQAVTFFAAVAELQLRVRAWGLEKDGLSGG 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2232 232 Pfam Seed dormancy control 24 100 IPR025422 GO:0006351|GO:0043565
Lal1g2232 232 ProSiteProfiles DOG1 domain profile. 7 229 IPR025422 GO:0006351|GO:0043565
Lal1g2232 232 PANTHER - 5 228 - -
Lal1g2232 232 PANTHER TRANSCRIPTION FACTOR HBP-1B(C38)-LIKE ISOFORM X1 5 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2232 Lal-Chr1 24288258 24290921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2232 8 221 Calmodulin-binding Proteins AT1G77920 27.315 1.73e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2232 - - gmx:100780874 310.842