Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2225 ATGGCTATGCTGAATTTTATAACTATTATCCTTATTATAAGTATATGCAACATGTATGTACTAAATCATTATTCATTGAAGAGTTTGTTTACATTCCTAATAGCCTCTTTACCTCATACTGCTTCAGCTGCAATGCAAATAGGGAGTGAAGCAAATGCTCTATTGAATTGGAAAGCTAGCCTTGACAACCAAAGTCAGGTTTCATTGTATTCATGGTATGGCAATAATCCTTGTAGTGATTGGGTGGGAATCCATTGTCATGAGTCCAAATCTGTCTCCACTATAAGCCTCAGAGATATGGGACTAAGAGGTATGCTTCATAGTCTCAATTTCTCATCACTTCCAAATATTCACACTATAGATATAAGGAATAACTCATTTAATGAAACTATTCCCTCACAAATTGGACTATCGTTGTCCAATTTGGAGACTCTTGATTTCTCCTTAAATCGATTCTCTGGCAGCATTCCCAAAAGCATTGGTAACCTTTCAAAACTCTCATATCTTGATCTCGGCCAAAATAATATCTCTGGGACTATTCCAACTGAGATAACAAAGTTGGTTGGTCTTTATACACTGTCATTGCAAGAAAATGTTTTGAGTGGGTCCATCCCTCTAGAAATAGGCTTATTGAGCAATTTGACAATACTTGCTTTACAATGGAACAATCTCAGAGGGACAATTCCAAAGTCTATAGAAAAGTTAACCAATTTGTCAAGTCTAGATGTACGAAGCAATAACCTTTCTGGCAGCATCCCTCAAAGAATTTGGCTTATGGACCTAACTCACTTATCACTCGCGGTTAATAACTTCTATGGTAACATCTCCGAAGATATGTGGAAGATGAGGAACCTAGAGAATATGTTTCTTCAGGAAAGTGGCCTTTCTGGGTCCCTGTCACAATTTTGGATGTTGGGGAAATTAAGAAAAGTTGATATTAGCAGTTGCAACCTCACTGGATCTATCCCTATTTCAATAGGAATATTGGCCAACATATCAATTCTCAGGTTAAAAAACAACAAATTATCTGGTCACATTCCTAGTGAAATTGGAAAACTGGCCAACCTTAGAAGTCTATGGTTTAGAGGTAATAATCTTTCTGGTCCCATTCCTGGGGAAATTGGAATGATGGCAAGTATGTATGACCTTGATTTTTCTAATAACTTTCTCTCTGGTAGAATCCCACCTACATTAGGAAATTTGAGCAATTTACAATATCTTTACCTTTACGGCAACACACTCTCTGGTTCTATTCCTGATGAAGTAGGAAAACTCTATTCTCTTATTCACATGCAGTTGTTCCAAAATAATCTTTCTGGGTCAATCCCACTCTTCATAGGTAACTTGGTTAATTTGGAAAGCTTACTTCTTTTTATAAATAAACTCTCTGGACCAATTCCTTTCACTATTGGAAACTTGACCAAACTCAAACAACTATCCTTATTTTCAAATAATTTATCAGAATCAATTCCTCCAAGTTTTGAAAACTTGACCCATTTAGAAAATTTGCAATTAGCTTATAATCATCTAACTGGCCATTTGCCTCACAACATTTGCCTTGGAGGAATATTGACCAAATTTTCTGCTTCAAGTAACCACTTTATAGGTCAAATTCCAAAGAGTCTCAAGAATTGTTCCAGTCTTATAAGAGTAAGACTAGAACAAAACCAATTGACTGAAAATATGACACAAGGTACTTTTGAGTGTCAAAATTTGGACTACATTGATTTAAGTGACAATAACTTATATGGGAACCTTTCACCAAACTGGGGGAAATGCAACAAACTCACAAGTCTCAAGATCTCTAACAATAAATTATCTGGTGTTATACCACAAGAACTAGGAGAGGCAACCAACTTAGGTGAACTTCACCTATCTTCGAACTATCTTACAGGACAAATTCCAAAGGAGCTAGGTAAGTTGACCTCGTTGATCGAACTTTTCTTAAGCAGTAATCTCCTTTCAGGGAATGTTCCGATAGAAATAGCATCTTTGATGGAACTCCAAATCTTGGCGCTTGCTGAAAATAATTTCAATGGTTTCATCACAATACAACAAGGAAGTTTGCCCAAGTTATGGCAGTTGAATTTAAGCCATAATAAATTTGTGGGACATATTCCTGTTGAGATTGCCCAATTCAAACAACTTCAAAGCCTTGATCTTAGTAACAATTTCTTTGGCGGAAAAATACCCTTCATACTTAGAGAGTTGATTTACCTAGAAACATTGAATCTCTCACATAATAATCTTTCAGGTACCATCCCCTCTGATTTTGATGGTATGTTAAGCCTGACAAATGTTAACATATCATACAACCAATTAGAAGGTCCACTTCCAAATATTCCTGCCTTTCAAAAAGCTTCAATTGATGCATTGAGAAATAACAAAGGCTTGTGTGGTAAAATCTCTGGCCTTGAACCTTGCCCACCAACATCAAGCAGCAATTCTCACCATCACCAGAATACCAAAGTCATAGTACTTGTTTTAACTATTACTTTGGCCATTCTACTACTTGTGATACTGGTGTTTTTCATCTCATGTCGCCTTTACCGAAGTGCAACTACAAAAGAAAACCAAGTTGTTGAGCCACAAAATCAAAATCTTTTTGCAATATGGAGTTATGATGGGAAAATGGTGTATGAGAATATCATTGATGCCACAGAAGATTTTCACAGAAAATATCTCATTGGAGTTGGAGGATGTGGATCTGTTTATAGAGCTGAATTGCCAACTGGTCAAGTTGTTGCTGTGAAAAAACTTCATTCAATACCAAATGAGGAAACATCTACTCTCAAAGCTTTCCAAAGTGAGATACAAGCCTTGACAGAAATTCGGCATCGTAACATTGTGAAACTATATGGGTTTTGTTCACATTCTCTAAACTCATTTTTGGTTTATGATTTGGTGGAAAGAGGTAGCATTGATAAGATCCTCCAAAATGATGCACAGGCGAATGAGTTTCATTGGAACAGAAGGGTGGATGTTGTTAAAGGAGTTGCTAATGCATTGAGCTATATGCACCATGATTGTTCACCTCCTATTATTCATAGAGATATATCATCAAAGAATGTCCTTTTAGATTTGGATTATGAAGCTCATGTTTCTGATTTCGGAACAGCTAAGTTTCTTAATCCAGATTCTTCCAATTTGACCTCATTTGCAGGCACTTATGGATATGTTGCTCCTGAACTTGCATATACTATGGAAGTGAATGAGAAATGTGATGTTTATAGCTTTGGGGTATTTGCCTTGGAAATAATATTTGGAAAGCATCCTGGAGAAATTATATCATCTACAATGTTATCATCTTTGGAAGTTGACAATTTCCCATTGAATGATAATTTGGATCAACGTCTTCCTAATCCAATGAATCCAAATGACAAGGAAATTATATCAATTCTTAGAACATCAATTGCATGCTTGAGAACAAATCCACTTTCTCGCCCGACCATGGAACAGGTAGTGAAGGAACTCTTAATACATGTTGGTTAG 3492 0.3628 MAMLNFITIILIISICNMYVLNHYSLKSLFTFLIASLPHTASAAMQIGSEANALLNWKASLDNQSQVSLYSWYGNNPCSDWVGIHCHESKSVSTISLRDMGLRGMLHSLNFSSLPNIHTIDIRNNSFNETIPSQIGLSLSNLETLDFSLNRFSGSIPKSIGNLSKLSYLDLGQNNISGTIPTEITKLVGLYTLSLQENVLSGSIPLEIGLLSNLTILALQWNNLRGTIPKSIEKLTNLSSLDVRSNNLSGSIPQRIWLMDLTHLSLAVNNFYGNISEDMWKMRNLENMFLQESGLSGSLSQFWMLGKLRKVDISSCNLTGSIPISIGILANISILRLKNNKLSGHIPSEIGKLANLRSLWFRGNNLSGPIPGEIGMMASMYDLDFSNNFLSGRIPPTLGNLSNLQYLYLYGNTLSGSIPDEVGKLYSLIHMQLFQNNLSGSIPLFIGNLVNLESLLLFINKLSGPIPFTIGNLTKLKQLSLFSNNLSESIPPSFENLTHLENLQLAYNHLTGHLPHNICLGGILTKFSASSNHFIGQIPKSLKNCSSLIRVRLEQNQLTENMTQGTFECQNLDYIDLSDNNLYGNLSPNWGKCNKLTSLKISNNKLSGVIPQELGEATNLGELHLSSNYLTGQIPKELGKLTSLIELFLSSNLLSGNVPIEIASLMELQILALAENNFNGFITIQQGSLPKLWQLNLSHNKFVGHIPVEIAQFKQLQSLDLSNNFFGGKIPFILRELIYLETLNLSHNNLSGTIPSDFDGMLSLTNVNISYNQLEGPLPNIPAFQKASIDALRNNKGLCGKISGLEPCPPTSSSNSHHHQNTKVIVLVLTITLAILLLVILVFFISCRLYRSATTKENQVVEPQNQNLFAIWSYDGKMVYENIIDATEDFHRKYLIGVGGCGSVYRAELPTGQVVAVKKLHSIPNEETSTLKAFQSEIQALTEIRHRNIVKLYGFCSHSLNSFLVYDLVERGSIDKILQNDAQANEFHWNRRVDVVKGVANALSYMHHDCSPPIIHRDISSKNVLLDLDYEAHVSDFGTAKFLNPDSSNLTSFAGTYGYVAPELAYTMEVNEKCDVYSFGVFALEIIFGKHPGEIISSTMLSSLEVDNFPLNDNLDQRLPNPMNPNDKEIISILRTSIACLRTNPLSRPTMEQVVKELLIHVG 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2225 1163 Pfam Protein kinase domain 890 1157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2225 1163 ProSiteProfiles Protein kinase domain profile. 890 1160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2225 1163 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 387 1159 - -
Lal1g2225 1163 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 32 189 - -
Lal1g2225 1163 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 167 310 - -
Lal1g2225 1163 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 305 419 - -
Lal1g2225 1163 Gene3D Ribonuclease Inhibitor 521 812 IPR032675 -
Lal1g2225 1163 Gene3D Ribonuclease Inhibitor 379 520 IPR032675 -
Lal1g2225 1163 Gene3D Ribonuclease Inhibitor 47 203 IPR032675 -
Lal1g2225 1163 Pfam Leucine rich repeat N-terminal domain 49 86 IPR013210 -
Lal1g2225 1163 Gene3D Phosphorylase Kinase; domain 1 850 968 - -
Lal1g2225 1163 SUPERFAMILY L domain-like 110 395 - -
Lal1g2225 1163 SMART LRR_typ_2 235 259 IPR003591 -
Lal1g2225 1163 SMART LRR_typ_2 641 665 IPR003591 -
Lal1g2225 1163 SMART LRR_typ_2 139 162 IPR003591 -
Lal1g2225 1163 SMART LRR_typ_2 689 713 IPR003591 -
Lal1g2225 1163 SMART LRR_typ_2 473 496 IPR003591 -
Lal1g2225 1163 SMART LRR_typ_2 114 138 IPR003591 -
Lal1g2225 1163 SMART LRR_typ_2 737 760 IPR003591 -
Lal1g2225 1163 SMART LRR_typ_2 329 353 IPR003591 -
Lal1g2225 1163 SMART LRR_typ_2 401 425 IPR003591 -
Lal1g2225 1163 SMART LRR_typ_2 211 234 IPR003591 -
Lal1g2225 1163 SMART LRR_typ_2 497 521 IPR003591 -
Lal1g2225 1163 SMART LRR_typ_2 163 187 IPR003591 -
Lal1g2225 1163 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1014 1026 IPR008266 GO:0004672|GO:0006468
Lal1g2225 1163 SUPERFAMILY RNI-like 311 631 - -
Lal1g2225 1163 Gene3D Transferase(Phosphotransferase) domain 1 969 1161 - -
Lal1g2225 1163 SUPERFAMILY Protein kinase-like (PK-like) 873 1158 IPR011009 -
Lal1g2225 1163 Gene3D Ribonuclease Inhibitor 204 303 IPR032675 -
Lal1g2225 1163 SMART LRR_sd22_2 353 368 - -
Lal1g2225 1163 SMART LRR_sd22_2 473 499 - -
Lal1g2225 1163 SMART LRR_sd22_2 401 422 - -
Lal1g2225 1163 SMART LRR_sd22_2 211 237 - -
Lal1g2225 1163 SMART LRR_sd22_2 139 165 - -
Lal1g2225 1163 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 387 1159 - -
Lal1g2225 1163 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 32 189 - -
Lal1g2225 1163 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 305 419 - -
Lal1g2225 1163 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 167 310 - -
Lal1g2225 1163 Pfam Leucine rich repeat 715 774 IPR001611 GO:0005515
Lal1g2225 1163 Pfam Leucine rich repeat 115 176 IPR001611 GO:0005515
Lal1g2225 1163 Gene3D Ribonuclease Inhibitor 304 378 IPR032675 -
Lal1g2225 1163 SUPERFAMILY L domain-like 566 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2225 Lal-Chr1 24204033 24208001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2225 112 254 Receptor kinase-like Gene Family AT4G08850 42.657 2.10e-20 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal1g2225 Pkinase 7.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2225 - - lang:109325562 1443.33