Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2192 ATGTATCTGAAGCTTGTAGCAGTGTTGTTTTTGTTGATAACAGTAGTAACCAGTGAAGATATCAGTTTCATCTATAATGGTTTCAAATCAGCTCAATTATATCTTGATGGTATTGCTGAGTTAACTTCTAATGGCCTTCTTAAACTCACCAATGATACCAAACAACAAAAGGGTCATGCTTTCTACCAAAATCCAATAGTTTTCAAGAACAATACCAATGGAACTGTGTTTTCTTTCTCCACAAGTTTTGTCTTTGCCATAAGATCTGAATATCCTACTCTGAGTGGTCATGGGATTGTTTTTGTAGTTTCTCCAACAATAGGGCTTCCAAATTCTCTACCAAGCCAGTACCTTGGCCTCTTCAATGAGACAAACAATGGAAACAGCAGCAACCATGTTTTCGGGGTCGAAATCGATACGATTCTGAGCAGTGAATTTTATGATATCAATGACAACCATGTTGGAATTGATATCAATGACCTTAAGTCAGAAAAATCAGCTCCTGCAGGGTACTACGATATCGCCGATTTTAAGAATTTGAGTCTGATTAGTGGAAATCCAATCCAGGTATGGGTAGAATATGATGGTATAAAGAAGCAAATTGATGTTACTTTAGCTCCAATTAACTTTAACAAACCAGAAAAGCCTTTGTTATCATTGACCAAAGACCTTTCTCCAATTCTAAACAATAGCATGTATGTTGGATTCTCTTCTTCTACTGGCTCAGTCCTAACTTCTCATTATGTTCTAGGTTGGAGTTTTAAGGTTAATGGAAAATCTCAAGAACTTGTAATTTCTGAACTTCCTAATCTTCCTAGACTAAGTGATAAACAAGTGTCTAAGGTTATCACTATTGGATTGCCTTTGATATCAATTAGTTTTGTTCTTTTGGTAACCCTAGCAATAGTTCATTTCATCAAAAGGAAGAAGAAGTTTTCGGAGTTGCTTGAAGATTGGGAACAGGACTATGGTCCTCATAGATTCAAGTACAAGGATCTTTATTTTGCCACAAAAGGGTTTGGAGAGAATGAGCTATTAGGAAGTGGTGGATTTGGTAGAGTCTACAAAGGTGTTATGCCGATTTCCAAAATCGAGGTTGCGGTAAAGAGGGTGTCTCATGAATCAAGACAAGGGATGAAGGAATTTGTAGCTGAAATCGTTAGCATCGGTCGCCTTTGTCATAGGAATCTAGTCCCTCTTCTCGGCTATTGCAGGCGCAGAGGAGAATTGCTTTTGGTGTATGATTATATGCCTAATGGAAGCCTAGACAAGTATCTCTATAACAAACCAAGAGTGACCCTTAATTGGAGCCAAAGGTTTAAGATCATCAAAGGCGTCGCTTCGGGTTTGTTTTATCTACACGAAGAATGGGAGCAAGTTGTAATCCACAGAGACATTAAGGCCAGCAATGTGCTACTAGATTCTGAATTGAATGGTAGATTAGGTGACTTTGGTCTTGCAAGGTTGTATGATCATGGCAATGATCCTCAAACTACTCATGTTGTTGGAACTCTTGGCTATCTTGCACCTGAGCATACTAGAACAGGTAAGGCCACAAAAAGTTCCGATGTGTTCGCTTTCGGCGCATTTCTATTGGAAGTTACATGTGGAAGGAGGCCTATAGAGCTAGTAAGGGAAAGTGAGAGTGTAATTTTGGTTGATTGGGTTTTTGATTTTTGGAAAAAGGGTAAGATAATTGAGGCAAAAGATCAAAATTTGGGTAATGATTATATATTGGAAGAGGTGGAGCTAGTGTTGGAACTTGGTTTATTGTGCTCACATTCTGAGCCATTGGCTAGGCCAAGAATGCGCCAAATTGTGCAATATTTGGAGAAGGAAGTGTCTTTGCCAGATTTGTCTTTGCTTACATTATCTTCCAATGGCTTAACTTTTGGCCACCATGAAAATTTTCAAGACTTTCCAATGTCATATCCTTCTTCTATGGATACACCATTTTCTCATAATTCTTCAGTTTGTGAGTCACTTCTCTCTGGTGGTCGTTGA 2004 0.3852 MYLKLVAVLFLLITVVTSEDISFIYNGFKSAQLYLDGIAELTSNGLLKLTNDTKQQKGHAFYQNPIVFKNNTNGTVFSFSTSFVFAIRSEYPTLSGHGIVFVVSPTIGLPNSLPSQYLGLFNETNNGNSSNHVFGVEIDTILSSEFYDINDNHVGIDINDLKSEKSAPAGYYDIADFKNLSLISGNPIQVWVEYDGIKKQIDVTLAPINFNKPEKPLLSLTKDLSPILNNSMYVGFSSSTGSVLTSHYVLGWSFKVNGKSQELVISELPNLPRLSDKQVSKVITIGLPLISISFVLLVTLAIVHFIKRKKKFSELLEDWEQDYGPHRFKYKDLYFATKGFGENELLGSGGFGRVYKGVMPISKIEVAVKRVSHESRQGMKEFVAEIVSIGRLCHRNLVPLLGYCRRRGELLLVYDYMPNGSLDKYLYNKPRVTLNWSQRFKIIKGVASGLFYLHEEWEQVVIHRDIKASNVLLDSELNGRLGDFGLARLYDHGNDPQTTHVVGTLGYLAPEHTRTGKATKSSDVFAFGAFLLEVTCGRRPIELVRESESVILVDWVFDFWKKGKIIEAKDQNLGNDYILEEVELVLELGLLCSHSEPLARPRMRQIVQYLEKEVSLPDLSLLTLSSNGLTFGHHENFQDFPMSYPSSMDTPFSHNSSVCESLLSGGR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2192 667 PANTHER - 4 648 - -
Lal1g2192 667 ProSiteProfiles Protein kinase domain profile. 340 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2192 667 Gene3D - 18 270 - -
Lal1g2192 667 ProSitePatterns Protein kinases ATP-binding region signature. 346 369 IPR017441 GO:0005524
Lal1g2192 667 SUPERFAMILY Protein kinase-like (PK-like) 314 611 IPR011009 -
Lal1g2192 667 Pfam Protein kinase domain 342 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2192 667 SMART serkin_6 340 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2192 667 CDD STKc_IRAK 346 612 - -
Lal1g2192 667 Gene3D Phosphorylase Kinase; domain 1 325 416 - -
Lal1g2192 667 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 4 648 - -
Lal1g2192 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 275 IPR013320 -
Lal1g2192 667 CDD lectin_legume_LecRK_Arcelin_ConA 21 258 IPR001220 GO:0030246
Lal1g2192 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Lal1g2192 667 Pfam Legume lectin domain 21 268 IPR001220 GO:0030246
Lal1g2192 667 Gene3D Transferase(Phosphotransferase) domain 1 417 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2192 Lal-Chr1 23939874 23941877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2192 17 667 Receptor kinase-like Gene Family AT2G37710 65.496 0.0 876
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lal1g2192 Pkinase 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2192 - - gmx:100783815 1052.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g2192 1 23939874 23941877 Lal1g2192 1 23939874 23941877 ECH
Lal9g1599 9 18346379 18347845 Lal1g2192 1 23939874 23941877 LSH