Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2184 ATGGTTGAGTCAACCATGTCAAAGACAATGATGGAAGAAGTAGTAATGGCTTCTACTTGGTCAGAAGGGTCAGAAGATCATGATTATGAGCTTGTGAGAGAGCTTTTAGATGATGTATCTCCACTTCTTATGATGCCAGAAGTGTCAAATGATGAGCACAATATAAGTAGTGCATCATCTTCAATTGATGACAATGTTATTAATAAGTTTCTTTGCAACATTTATTCAGGACCAACCATCTTAGATATTGAAAATGCTTTATCAGTAACCAACCATAGAGAGCATTTTCAACATATATCACCACCTAGTGTTTCCCTATTGGAAAGGGATTTGGGTAAGATTGAGAATAAGTACACCTTGAAAATCAAGTGTTTTGGCAATGGTATGGGTGATGATGGCTATAAGTGGAGGAAATATGGCCAGAAATCTATTAAGAATAGCCCAAATCCTAGGAGCTACTATAGGTGCACCAATCCAAGGTGCAGTGCCAAGAAACAGGTTGAGAGATCCAATGAGGACCCAGACACACTTATCATCACTTATGAAGGGCTCCACCTTCACTTTGCTTACCCATACTTCCACATGAACCAGCCTCAGCAACCTTATAATCCACCAATCAAGAAGTTAAAGCCCAACTATTTACATCAAGAAGCCCAAGATCATAAAGCCCATGAATCCCATGAAGCCCAAGTCAATGCTACTTTTGGACTAACATCATCAACTTTACTAGACACTCAACAAGATATAGCTCAAGAAACTTTGGGTTCAAAAGGGTTACTTGAAGATATGGTGCCATTCATGGTTAGGAACCCTACAAATGAAGTCAATAGTGGTCACCCCAAATTTTATTGTTCTTCATTCCCTTCTCCTCAAGTATCTCCTCCTTCTCTTTGGCCTTCAAATTTCCCTAACTCCTCTTATACCATGGGCTTAAATTCTAGCACCTAG 948 0.3935 MVESTMSKTMMEEVVMASTWSEGSEDHDYELVRELLDDVSPLLMMPEVSNDEHNISSASSSIDDNVINKFLCNIYSGPTILDIENALSVTNHREHFQHISPPSVSLLERDLGKIENKYTLKIKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSNEDPDTLIITYEGLHLHFAYPYFHMNQPQQPYNPPIKKLKPNYLHQEAQDHKAHESHEAQVNATFGLTSSTLLDTQQDIAQETLGSKGLLEDMVPFMVRNPTNEVNSGHPKFYCSSFPSPQVSPPSLWPSNFPNSSYTMGLNSST 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2184 315 ProSiteProfiles WRKY domain profile. 125 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal1g2184 315 Pfam WRKY DNA -binding domain 131 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal1g2184 315 PANTHER WRKY TRANSCRIPTION FACTOR 49-RELATED 24 281 - -
Lal1g2184 315 SUPERFAMILY WRKY DNA-binding domain 128 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal1g2184 315 SMART WRKY_cls 130 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal1g2184 315 Gene3D WRKY domain 126 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal1g2184 315 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 24 281 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2184 Lal-Chr1 23867785 23870662 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2184 41 274 WRKY Transcription Factor Family AT5G43290 43.725 2.19e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal1g2184 WRKY 6.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2184 - - gmx:100810459 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g2184 1 23867785 23870662 Lal1g2184 1 23867785 23870662 ECH