Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2182 ATGATAATGGACCCAAGTCTTGATCGGATTAATGGTTCCTTAAACGAAAACCGGTTTGGGAATCAGTCTTTGCCAATTCTTCAGAATCAGATATATGAAAATGGTTTCTTTGATCAAACTAGGGAATTTGGTTACCTTCAGTCCAATCTAATGCCTGCTGATACACCTTCATCCTCAATTTTGACACACGAGGAACCTTCTCTAGAGGATTGTGATTTTTCTGATGCGGTTTTGAGATACATTAGTCAGATCCTCATGGAAGAAGATATGGAAGATAAGACAGATATGCTTCAGGATTCTTTGGATCTTCAAGTTGCCGAGAAATCATTCTATGAGGTAATAGGCGAAAAGTACCCTCATTCGCAATTAGGAAATCAAAGCTTTATTAATCCAAATGATGGAGGTGGAGATCTTAACTTCTCTGAAAATTATGGTAGTTTTCATGGTAATGATGGTGATCTCAGTAGCATTTTTAGTACCAACAATTCTATCCTCGGAAACTTCGGTCATGTTCCTTACAAAAATTTTCTAGGTCATAGCAACATTTCACAATCTTCTTATGGCTCTTCAAATAGTGTAAGAAGTAGTGTAGAAGTGCATTTGGACTCTCCAAACAGTATTGTTCAGATGCCTGATCTGAACAGTGAGAATCAATCCATTTGCCAATTTCAAAAGGGTGTTGAGGAGGCTAGTAGGTTTCTTCCAAGTGGAAATCAACTCTTTGCTAATTTCGATGTGGCTAATTTTTCAAGACTAGTGCCTAAAGTGGGGATCGGGACTGATAAGTCTTCGGTTAAGGTGGAGAAGGATGAGGGGGAGTCTTTTCTTGACGGATCGAAGGGAAAGAAGCATCCTCACATGGAAGAGGAAGATGTTGGAGAAAATAGAAGCAGCAAGCAAGCTGCAGTTTACTCAGAACCTACATTGCGGTCGACTATGATGGATATAATCCTTCTTCATAGCACAGGAGATGGCAGGGACCATTATATGGCTCGTCGAGAGGCTTTGCAGAATAAGAACAACAAGATAGTGCTGCCAAACGGTAAATCAAAAGCTTCCAGTAGCAGTAAGGGACGTGGTGGTAAGAAACAAAATGGGAAAAAGGAAGTGGTCGATTTGAGAACACTTCTCATTCTTTGTGCACAAGCTGTTGCCGCGGATGACAACCGAAGTGCACACGAGTTTCTAAAACAGATCAGACAGCACTCAAGTCCTTTTGGGGATGGAAATCAGAGGTTGGCTCATATCTTCGCAGATGGCCTTGAGGCACGCTTGGCTGGTACCGGAAGCCAAATTTATAAAGGACTTGTAAGTAAAATAACATCAGCTACTGATTTTCTGAAAGCTTATTATCTGCTCATTGCTGCTTGCCCTTATAGGAAGATGTCTAGTTTTGTTTCAAACGTCACAATAAGGAAATCTTCAACACATTCAATGCGGGTCCATGTTATAGATTTTGGTATCCTTTATGGTTTCCAGTGGCCTACTTTTATACAGAGACTTTCATGGAGACCCGGAGGACCACCGAAACTTCGGATTACAGGAATAGACTTCCCGCAACCTGGTTTCAGGCCTGCGGAAAGAATTATCGAAACTGGACGCCGCTTGGCAGCTTATGCTGAAAGTTTTAATGTGCCATTTGAGTACAATGCCATAGCGAAAAAATGGGAAACAATTCAACTTGAGGAACTTAATATTGATAGGGATGAGTACCTTGTTGTTACCTGTTTTTATAGAGGTAAAAACTTGCTGGATGAATCTGTGGTAGTAGACAGTCCGAGGAACAAATTCCTTAGTTTGGTAAGGAAAATCAATCCCGATATATTCATTCATGGCATTCTTAATGGAGCATTTAATGCCCCTTTCTTCGTGACTAGATTCAGAGAGGCACTGTTTCACTTTTCTTCACTATTTGATATGCTTGATACTATTGTGCCTCGTGAAGACTGGGAGAGGATGCTAATTGAGAAAGAGGTACTTGGGAGGGAAGCATTGAATGTTGTAGCATGTGAAGGCTATGAGAGAGTAGAGAGGCCCGAAACGTATAAGCAGTGGCAACTCCGTATTCTAAGAGCCGGATTTTCACAACAAGCTTTTGACCGTGAGATAGTACAGACAGCAATGAAGAAAGTAAGATCGAGCTTCCACAAAGATTTTGTAATGGATGAAGATAGCCAGTGGTTGTTGCAAGGTTGGAAGGGACGAATCATTTATGCGCTTTCTTGTTGGAAACCTGCATGA 2241 0.411 MIMDPSLDRINGSLNENRFGNQSLPILQNQIYENGFFDQTREFGYLQSNLMPADTPSSSILTHEEPSLEDCDFSDAVLRYISQILMEEDMEDKTDMLQDSLDLQVAEKSFYEVIGEKYPHSQLGNQSFINPNDGGGDLNFSENYGSFHGNDGDLSSIFSTNNSILGNFGHVPYKNFLGHSNISQSSYGSSNSVRSSVEVHLDSPNSIVQMPDLNSENQSICQFQKGVEEASRFLPSGNQLFANFDVANFSRLVPKVGIGTDKSSVKVEKDEGESFLDGSKGKKHPHMEEEDVGENRSSKQAAVYSEPTLRSTMMDIILLHSTGDGRDHYMARREALQNKNNKIVLPNGKSKASSSSKGRGGKKQNGKKEVVDLRTLLILCAQAVAADDNRSAHEFLKQIRQHSSPFGDGNQRLAHIFADGLEARLAGTGSQIYKGLVSKITSATDFLKAYYLLIAACPYRKMSSFVSNVTIRKSSTHSMRVHVIDFGILYGFQWPTFIQRLSWRPGGPPKLRITGIDFPQPGFRPAERIIETGRRLAAYAESFNVPFEYNAIAKKWETIQLEELNIDRDEYLVVTCFYRGKNLLDESVVVDSPRNKFLSLVRKINPDIFIHGILNGAFNAPFFVTRFREALFHFSSLFDMLDTIVPREDWERMLIEKEVLGREALNVVACEGYERVERPETYKQWQLRILRAGFSQQAFDREIVQTAMKKVRSSFHKDFVMDEDSQWLLQGWKGRIIYALSCWKPA 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2182 746 MobiDBLite consensus disorder prediction 340 360 - -
Lal1g2182 746 PANTHER SCARECROW-LIKE PROTEIN 9 41 745 - -
Lal1g2182 746 ProSiteProfiles GRAS family profile. 364 744 IPR005202 -
Lal1g2182 746 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 41 745 IPR005202 -
Lal1g2182 746 MobiDBLite consensus disorder prediction 267 300 - -
Lal1g2182 746 MobiDBLite consensus disorder prediction 267 296 - -
Lal1g2182 746 MobiDBLite consensus disorder prediction 337 367 - -
Lal1g2182 746 Pfam GRAS domain family 373 744 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2182 Lal-Chr1 23824969 23827209 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2182 69 745 GRAS Transcription Factor Family AT2G37650 53.577 0.0 668
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal1g2182 GRAS 5.8e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2182 - - ccaj:109816616 1134.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g2182 1 23824969 23827209 Lal1g2182 1 23824969 23827209 ECH
Lal1g2182 1 23824969 23827209 Lal8g0100 8 722464 725804 ECH