Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal1g2180 | ATGGCTGCAATGGTTCTTCTCTACATTGCATCATTGATCTCTCTCTTTGTTCCAACCACTGCTAGAATCCCTGGAGTTTACACTGCTGGTTCTTGGGACAGTGCTCATGCCACTTTCTATGGTGGCAGTGATGCCTCTGGAACAATGGGTGGTGCTTGTGGCTATGGGAACTTGTATAGCCAAGGCTATGGTGTGAGCAATGCAGCACTAAGCACAGCACTTTTCAACAATGGTCTAAGTTGTGGTGCATGTTTTGAGATCAAGTGTGATGAAGATCCAAATTGGTGCAACATTGGTAACCCTTCAATTATGGTCACTGCCACTAACTTTTGTCCACCAAATTATGATCTTCCAAGTGATAATGGTGGATGGTGCAACCCACCAAGACAACACTTTGATCTTGCTATGCCAATGTTCCTTAAAATTGCTCAGTATAAAGCTGGAATTGTCCCTGTTGCATTCAGAAGGGTGCCATGCAAGAAGACAGGAGGCATCAGATTCACAATCAACGGTCACCATTACTTCAACTTGGTTTTGATCACCAACGTCGCGGGTGCAGGGGATATCGTGGTCGTGAGTGTGAAAGGAACTAACACAGTTTGGTCAAGCATGAGCCGCAACTGGGGGCAAAATTGGCAATCCAATGTTGTTTTGGTGGGCCAGGCCTTATCCTTTAGAGTCACCGGCAGTGACAAAAGAACATCAACCTCTGTCAACGTGGCACCATCTAATTGGCAGTTTGGGCAAACCTTCACGGGAAAGAATTTTCGTGTATAA | 777 | 0.4556 | MAAMVLLYIASLISLFVPTTARIPGVYTAGSWDSAHATFYGGSDASGTMGGACGYGNLYSQGYGVSNAALSTALFNNGLSCGACFEIKCDEDPNWCNIGNPSIMVTATNFCPPNYDLPSDNGGWCNPPRQHFDLAMPMFLKIAQYKAGIVPVAFRRVPCKKTGGIRFTINGHHYFNLVLITNVAGAGDIVVVSVKGTNTVWSSMSRNWGQNWQSNVVLVGQALSFRVTGSDKRTSTSVNVAPSNWQFGQTFTGKNFRV | 258 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal1g2180 | 258 | Gene3D | - | 164 | 256 | IPR036749 | - | |
Lal1g2180 | 258 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 50 | 164 | IPR007112 | - | |
Lal1g2180 | 258 | PRINTS | Expansin/Lol pI family signature | 31 | 46 | IPR007118 | GO:0005576 | |
Lal1g2180 | 258 | PRINTS | Expansin/Lol pI family signature | 49 | 67 | IPR007118 | GO:0005576 | |
Lal1g2180 | 258 | PRINTS | Expansin/Lol pI family signature | 71 | 89 | IPR007118 | GO:0005576 | |
Lal1g2180 | 258 | PRINTS | Expansin/Lol pI family signature | 147 | 163 | IPR007118 | GO:0005576 | |
Lal1g2180 | 258 | PRINTS | Expansin/Lol pI family signature | 201 | 215 | IPR007118 | GO:0005576 | |
Lal1g2180 | 258 | PRINTS | Expansin/Lol pI family signature | 239 | 253 | IPR007118 | GO:0005576 | |
Lal1g2180 | 258 | PANTHER | EXPANSIN-A15 | 3 | 257 | IPR002963 | GO:0009664 | |
Lal1g2180 | 258 | SMART | dpbb_1 | 67 | 154 | IPR007112 | - | |
Lal1g2180 | 258 | SUPERFAMILY | PHL pollen allergen | 161 | 253 | IPR036749 | - | |
Lal1g2180 | 258 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 174 | 253 | IPR007117 | - | |
Lal1g2180 | 258 | Pfam | Expansin C-terminal domain | 165 | 242 | IPR007117 | - | |
Lal1g2180 | 258 | PANTHER | EXPANSIN | 3 | 257 | - | - | |
Lal1g2180 | 258 | SUPERFAMILY | Barwin-like endoglucanases | 31 | 182 | IPR036908 | - | |
Lal1g2180 | 258 | Pfam | Lytic transglycolase | 68 | 153 | IPR009009 | - | |
Lal1g2180 | 258 | Gene3D | - | 19 | 160 | IPR036908 | - | |
Lal1g2180 | 258 | PRINTS | Expansin signature | 62 | 76 | IPR002963 | GO:0009664 | |
Lal1g2180 | 258 | PRINTS | Expansin signature | 89 | 100 | IPR002963 | GO:0009664 | |
Lal1g2180 | 258 | PRINTS | Expansin signature | 103 | 113 | IPR002963 | GO:0009664 | |
Lal1g2180 | 258 | PRINTS | Expansin signature | 122 | 139 | IPR002963 | GO:0009664 | |
Lal1g2180 | 258 | PRINTS | Expansin signature | 139 | 152 | IPR002963 | GO:0009664 | |
Lal1g2180 | 258 | PRINTS | Expansin signature | 163 | 175 | IPR002963 | GO:0009664 | |
Lal1g2180 | 258 | PRINTS | Expansin signature | 175 | 196 | IPR002963 | GO:0009664 | |
Lal1g2180 | 258 | PRINTS | Expansin signature | 210 | 231 | IPR002963 | GO:0009664 | |
Lal1g2180 | 258 | PRINTS | Expansin signature | 239 | 255 | IPR002963 | GO:0009664 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal1g2180 | Lal-Chr1 | 23798884 | 23802473 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal1g2180 | 3 | 258 | Expansin Gene Family | AT2G39700 | 77.734 | 2.41e-153 | 426 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal1g2180 | - | - | gmx:547955 | 478.404 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal1g2180 | 1 | 23798884 | 23802473 | Lal6g0282 | 6 | 1853604 | 1855918 | ECH | |
Lal1g2180 | 1 | 23798884 | 23802473 | Lal18g1325 | 18 | 15713540 | 15715012 | ECH | |
Lal1g2180 | 1 | 23798884 | 23802473 | Lal1g2180 | 1 | 23798884 | 23802473 | ECH | |
Lal1g2180 | 1 | 23798884 | 23802473 | Lal9g0224 | 9 | 1379058 | 1382124 | ECH | |
Lal1g2180 | 1 | 23798884 | 23802473 | Lal1g0322 | 1 | 1954767 | 1956562 | ECH | |
Lal1g2180 | 1 | 23798884 | 23802473 | Lal25g0141 | 25 | 886327 | 890321 | ECH | |
Lal2g1842 | 2 | 20747588 | 20750373 | Lal1g2180 | 1 | 23798884 | 23802473 | LSH |