Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2171 ATGGAATTCCCTAGTGGTTGGAGACTCTCTGATCGCAGTAGTCTGGTCCAAAACACTAGTCTCAATATAGAGATGGGATACAAGGAAAAGGTACCAAAAGTTGGTGATAACCAAGGAGAAGATGCAACATCAAGATTTTTTCAATGTAAATTCTGTTCAAGAAAGTTTCATAGCTCTCAAGCTTTAGGGGGGCACCAAAATGCTCATAAGAAAGAGAGAACAGCTGCAAGAAATGCTAAGAGGGTTTATGAGTACTCATATGTACCATTTTCTTCCCCATTCTCAAGCCCTATGGTTTTCTCTCCAACCCTTCATATGGGTATTTTGAACCCTCCAATGTTCATTACTTCCCATGCACCAAACCACCCTTATTTTCCTCAACAAGAAATGGCAGCACAATTTGGTTCAAATGGTGCACCTAGTTCAAGAAGTAAACTCAATGAGGAAGATGAGAATAGTTTCATTAATTGGCAAAGAAGCAACAACTTCAAAAGATGTGGCACATCTCAACATATATCATTGAAAAGTAACAATCAAAACATTGGAATTTGGAACAACAATGTTACAGAAGAAGGAAGAAAGCTTGACTTATCTCTTCATTATAGATTTTGTATAGAATTGAGATGA 627 0.3748 MEFPSGWRLSDRSSLVQNTSLNIEMGYKEKVPKVGDNQGEDATSRFFQCKFCSRKFHSSQALGGHQNAHKKERTAARNAKRVYEYSYVPFSSPFSSPMVFSPTLHMGILNPPMFITSHAPNHPYFPQQEMAAQFGSNGAPSSRSKLNEEDENSFINWQRSNNFKRCGTSQHISLKSNNQNIGIWNNNVTEEGRKLDLSLHYRFCIELR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2171 208 PANTHER PROTEIN LATE FLOWERING 38 200 - -
Lal1g2171 208 PANTHER ZINC FINGER PROTEIN JAGGED 38 200 IPR045320 GO:0003700
Lal1g2171 208 Gene3D Classic Zinc Finger 27 88 - -
Lal1g2171 208 ProSiteProfiles Zinc finger C2H2 type domain profile. 47 74 IPR013087 -
Lal1g2171 208 SUPERFAMILY beta-beta-alpha zinc fingers 44 74 IPR036236 -
Lal1g2171 208 ProSitePatterns Zinc finger C2H2 type domain signature. 49 69 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2171 Lal-Chr1 23739499 23740223 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2171 26 125 C2H2 Transcription Factor Family AT5G48890 50.450 3.97e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2171 - - gmx:100527084 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g2171 1 23739499 23740223 Lal1g2171 1 23739499 23740223 ECH