Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2154 ATGGACTTGAGGGATACTTGGGTTTTCTTCTTTCTGTTTTGTAACTTCTGCTTTGTCACTTTCTGTGGACAACATGGTTTCTTGAGTCTATCTTGTGGTGGAACAACCACTTTCAGTGATTCATCTAACATTTCATGGGTCCCAGACATTACTTACATAACCACAGGCAAGTCAATCACCATCAATTATAGTGATGGTTCCTTCTCAACAAATGTCTCAGCTCGGTTCTTCCCGAAATCGAGAGGTCGCATATGCTATAGAATACCGGTGGACAATGCAACTACATTGATTCTTGTGAGAGCAAAATTTGTATACAAGAACTATGATGGACTTGGAAAACCACCTAAGTTCTATGTTTCTCTTGGGACAGCTATTGCTGCTAATATAAATCTCGCAAAGGATGATCCGTGGACGGAAGAATTTCTATGGACATTCAATAAGGACACATTGCCGTTTTGTTTAAACGCAATTCCGAGTGGCGGTTCTCCTGTAATTTCTTCACTTGAAATCAGACCACTTCCTAAAGGATCCTACACAAAAGGCAAAGAAGATTTTCCGAATAAATTACTTCGGAAGAGTCATCGAATTGACTGTGGTTACACGTATGAGTCTATTCGGTATCCTATGGATCCATATGATAGAATATGGAATGCTGACAGAAGTTTCACACCATTTCATGCTACCGCCGAGTTTAAGATTCATAACAGCTTCAATCAGTCTAATATCGTGGAGAAGCCACCGGTTTCTGTTCTTCAAACTGGTAGAGTCTTGATGCGGCGAAATACACTGACATATAACCTCCCTCTTGATCTATTAGGGGACTACTATATCATCCTTTATTTTGCCGGAATTCTTCGAGTGTTCCCTTCATTTGATATATTGGTAAATGGAGATATTGTGAAATCAAACTATACAATAAAGAGCTCCGAAACCAGTGCTTTATATATTACACTAAAGGGAATCAATAGCTTGAATATAACATTAAGTAGTATCAGATTCTACCCACAAATCAATGCATTTGAGGTATATAATATGGTTGATATTCCATCTGAAGTCTCCTCAACTACAGTTTCAGCAATGCAGGTTATTCAGCAGTCCACTGGCTTGCATTTAGGATGGCAAGATGATCCCTGCTCTCCTTTCCCATGGGATCACATTGATTGTGAAAAAAACCTTGTTACATCATTGGATCTCTCAGACATAAATTTGAGATCAATTGGTCCTACATTTGGTGACTTGTTGGACCTAAAAACACTGGATTTGCACAACACATCACTTTCTGGTGAAATTCAGGATTTGAGTAGCTTGCAACATCTTGAAAAACTGAACCTTAGTTTCAATCAGCTAACATCCTTTGGTGTAGAGCTGAATAACTTGATCAACCTTCAAATATTAGACTTGCAAAACAATATGCTACAAGGAACTGTTCCTGATAGCTTAGGAGAGTTAGAGAACCTCCATTTACTGAACCTAGAAAACAACAAGCTACAAGGTCCACTTTCTGAGTCTTTGAACAAAGAAACCTTAGAAATCAGAACATCTGGGAATTTATGCCTTACTTTTTCTACAACCACATGTGTTGATGCATCATCCGATCCTCCGATTCAGACGCCACAAGTGACTATAGTTCCGAAAAGGAAACACAATGAAAATAACCATCTACCAATCATAATCGGCACGGTTGGAGGAGTTACACTTGCCCTTATCTTGATATGTCTTGTAGTAGTTATATACAAAACTAAAAAGAGATATGAAGTTTGTCATACAAGAGAAGAAACAGATATAAGGAACTGGGGTCCTGAAAAAGTCTTCTGCTACAAAGAAATCAAAGCAGCTACGAGCAATTTTAAAGAAGTCGTGGGACGGGGAAGTTTTGGATCTGTTTACCTTGGAAAACTTCGAAATGGAAAATCGGTAGCTGTCAAAGTTCGGTTTGACAAATCCCAACTTGGAGTTGATTCTTTTATGAATGAGATACATCTCTTGTCGAAAATCCGCCATCAAAATCTTGTTTCTCTGGAAGGATTTTGTCACGAACCGAAGCATCAGATATTAGTTTATGAGTACTTGCCTGGTGGATCCCTTGCTGATCATCTCTATGGCGTAAACAGCCGAAAAACTCCGTTAAGCTGGGTTCGAAGGTTGAAAATTGCAGTAGATGCAGCAAAAGGATTGGACTACTTGCATAATGGAAGTGAACCACGAATCATACACCGCGATATCAAGTGTAGTAATATCCTCTTGGACATGGAGATGAATGCTAAGGTTTGTGACTTTGGCTTATCTAAGCAAGTAAATCAGACCAATGCGACTCACATCACCACTGTTGTTAAGGGGACTGCTGGATATCTAGATCCAGAGTACTATTCGACTCGACAATTGACAGAGAAAAGTGATGTATATAGCTTTGGAGTTGTTCTTTTGGAACTCATTTGTGGAAGAGAGCCATTGACTCACTCTGGAACTCCTGACTCATTCAATTTGGTGTTATGGGTCATAGATTTGAGCCTCGACACAATGGTTGAGTTTTGCTTGTCTAGTGGTCTGGAGATCATAGATTTGAGCCTCGACACCAAGGCCAAGCCCTACTTGCAAGCTGGTGCATTTGAAGTTGTGGATGAAAGCATACAAGGAACTTTTGATATGGAAAGCATGAAAAAAGCAACATTGATTGCTATAAAGTCAGTGGAAATGAGTGCTTCACAAAGGCCACCTATTGCAGAGGTATTGGCAGAGCTAAAGGAAGCATATATTACACAACTCAGATTCATTGAATCATGTCAAAATCAGAATATACTTATACACAAAAGCTATTAG 2817 0.3926 MDLRDTWVFFFLFCNFCFVTFCGQHGFLSLSCGGTTTFSDSSNISWVPDITYITTGKSITINYSDGSFSTNVSARFFPKSRGRICYRIPVDNATTLILVRAKFVYKNYDGLGKPPKFYVSLGTAIAANINLAKDDPWTEEFLWTFNKDTLPFCLNAIPSGGSPVISSLEIRPLPKGSYTKGKEDFPNKLLRKSHRIDCGYTYESIRYPMDPYDRIWNADRSFTPFHATAEFKIHNSFNQSNIVEKPPVSVLQTGRVLMRRNTLTYNLPLDLLGDYYIILYFAGILRVFPSFDILVNGDIVKSNYTIKSSETSALYITLKGINSLNITLSSIRFYPQINAFEVYNMVDIPSEVSSTTVSAMQVIQQSTGLHLGWQDDPCSPFPWDHIDCEKNLVTSLDLSDINLRSIGPTFGDLLDLKTLDLHNTSLSGEIQDLSSLQHLEKLNLSFNQLTSFGVELNNLINLQILDLQNNMLQGTVPDSLGELENLHLLNLENNKLQGPLSESLNKETLEIRTSGNLCLTFSTTTCVDASSDPPIQTPQVTIVPKRKHNENNHLPIIIGTVGGVTLALILICLVVVIYKTKKRYEVCHTREETDIRNWGPEKVFCYKEIKAATSNFKEVVGRGSFGSVYLGKLRNGKSVAVKVRFDKSQLGVDSFMNEIHLLSKIRHQNLVSLEGFCHEPKHQILVYEYLPGGSLADHLYGVNSRKTPLSWVRRLKIAVDAAKGLDYLHNGSEPRIIHRDIKCSNILLDMEMNAKVCDFGLSKQVNQTNATHITTVVKGTAGYLDPEYYSTRQLTEKSDVYSFGVVLLELICGREPLTHSGTPDSFNLVLWVIDLSLDTMVEFCLSSGLEIIDLSLDTKAKPYLQAGAFEVVDESIQGTFDMESMKKATLIAIKSVEMSASQRPPIAEVLAELKEAYITQLRFIESCQNQNILIHKSY 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2154 938 ProSitePatterns Protein kinases ATP-binding region signature. 620 642 IPR017441 GO:0005524
Lal1g2154 938 CDD STKc_IRAK 620 915 - -
Lal1g2154 938 Gene3D Phosphorylase Kinase; domain 1 578 689 - -
Lal1g2154 938 ProSiteProfiles Leucine-rich repeat profile. 438 460 IPR001611 GO:0005515
Lal1g2154 938 SUPERFAMILY L domain-like 359 506 - -
Lal1g2154 938 SUPERFAMILY Protein kinase-like (PK-like) 602 919 IPR011009 -
Lal1g2154 938 Gene3D - 192 347 - -
Lal1g2154 938 SMART serkin_6 614 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2154 938 ProSiteProfiles Protein kinase domain profile. 614 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2154 938 Gene3D Transferase(Phosphotransferase) domain 1 690 932 - -
Lal1g2154 938 Gene3D Ribonuclease Inhibitor 355 528 IPR032675 -
Lal1g2154 938 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 860 926 - -
Lal1g2154 938 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 832 - -
Lal1g2154 938 PANTHER OS07G0107800 PROTEIN-RELATED 10 832 - -
Lal1g2154 938 PANTHER OS07G0107800 PROTEIN-RELATED 860 926 - -
Lal1g2154 938 Pfam Protein kinase domain 616 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2154 938 Pfam Malectin-like domain 30 344 IPR024788 -
Lal1g2154 938 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Lal1g2154 938 ProSitePatterns Serine/Threonine protein kinases active-site signature. 736 748 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2154 Lal-Chr1 23604056 23610488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2154 7 926 Receptor kinase-like Gene Family AT5G48740 58.849 0.0 1055
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lal1g2154 Malectin_like 5.9e-52 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2154 - - aprc:113850446 1419.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g2154 1 23604056 23610488 Lal1g2154 1 23604056 23610488 ECH