Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2146 ATGTGCTATATCAGTATTCTCAATTTCAATGCGGTTTTTGGAGTCTCCGTAACTATTTGCAATATTAATTGTCTCATGGATGAGAAGGTGGAGAAGAAAGGGTCTAAGATTGATGTAAGCAATTCAGGAAGTAGTTTTGAGTTGGAGCCAAATAAAGGAAAGAAAAAGAAGCATAAGGAGGGAAGTAAAAAACACGGAACTGATGAAATAGTTGATTTAAGTGAAGCCCAGGAGAAAAATTGTGCTGGTGAAGCAGCTGAGAGACAAATTGGGTCCATTGATGGAAACAGGGAAGAGGAGAACGATATCAATAAGAAAAAGAAGAAAAAGAAGAGAAAAGAGTCTGATGATTCATTAGCTGGAATGCATGAAATGGATGCCTCAAAGCCCAGAAAAAAGGGGAAAATGACTGAGGATAATGAGTTCAAAAGCAATGAAGGTGATCTTCCTTTGGTAAAAGACAATGAAGGTGAAGGTGATTATCAAAGCAAGATGAAGAAGAAGAAGAAGTCGAGTGGAAAAAGTAAACTGACGGAAAAGTTTAAAATCAATGAATGTGATCAAGATTTGGCCAAAAGCAATTTAACCGAAGACGATGACCAAGGCAAGGAGATGAAGAAGAAGGAACTCGGTAAAGGGAAACGTAAGGAGAGTAATGATGTTAATGAACATGAACAGGGCAAGAAGACAAAGGCAAAGAAGAAACCCAAACGAGTAACTTTTTCTGATAAAGTGGAGGTTTGTTCCAATGACAGCGTAGTGCATGGGATAAGATTTACATCGGAAGAAGATGAAAAGCTTAAAGAGGCTGTTTTTAATTATATAAAGATTCATGATTTGGGTGATGAAGGTTTACAAATGGTACTCCATTGCAGATCACATCCAGAAATTAGAGATTGTTGGAAGGAAATTGCATTAGCCTTACCTCACAGGCCTCATTCAACTGTGTATAATCGTGCTCATGTTGTGTTTGAAAGGGATGAGAGGCGTAAGTGGACACATGAAGAGCTTGAGTTTATTAAGTCGGTCCAGGAACAACATGGATCTGATTGGAAATCAATAGCCGATGTGTTGGGTAAAAGCCGTTTTCACGTCAAGGATACATGGCGTAGAATAAAATTAGCCACTGCAAAAACAGGACATTGGACCCAAGAGGAGTACCAAAATTTATTTGATTTAGTAAACTTGGATCTACGTGTAAGGGCTTCAGAGGAAACTAAGCAATCTAGACATGGTACATTTCGAGATAATATTAGTTGGGAGGCAATTTCTACCAAACTGGAAACTAGAACTAGTCAAATCTGCTGCAAAAAGTGGTATGACCAAATAACATCACCGATGGTCGCTGATAATTTATGGAGTGATACTGATGACTACCGCCTGATTAATGCTTTATTTACCTTGGATGCTTGCTGCTTTGAGGAGGTCGAGTGGGACGATTTGCTTGATCATAGAGCTGGTGATGTATGTAGAAAACGATGGAACGAAATGGTCCGACATATTGGAGAGCTTGTGGGGAAGTCATTTGCTGACCAAGTGGAAATTCTTGCAAAGAGATTCTGCCCTGACTTATTGGAAGCAAGAGAAGCCTTTGACAGCAAACCTGTGGTTAATTGA 1617 0.3921 MCYISILNFNAVFGVSVTICNINCLMDEKVEKKGSKIDVSNSGSSFELEPNKGKKKKHKEGSKKHGTDEIVDLSEAQEKNCAGEAAERQIGSIDGNREEENDINKKKKKKKRKESDDSLAGMHEMDASKPRKKGKMTEDNEFKSNEGDLPLVKDNEGEGDYQSKMKKKKKSSGKSKLTEKFKINECDQDLAKSNLTEDDDQGKEMKKKELGKGKRKESNDVNEHEQGKKTKAKKKPKRVTFSDKVEVCSNDSVVHGIRFTSEEDEKLKEAVFNYIKIHDLGDEGLQMVLHCRSHPEIRDCWKEIALALPHRPHSTVYNRAHVVFERDERRKWTHEELEFIKSVQEQHGSDWKSIADVLGKSRFHVKDTWRRIKLATAKTGHWTQEEYQNLFDLVNLDLRVRASEETKQSRHGTFRDNISWEAISTKLETRTSQICCKKWYDQITSPMVADNLWSDTDDYRLINALFTLDACCFEEVEWDDLLDHRAGDVCRKRWNEMVRHIGELVGKSFADQVEILAKRFCPDLLEAREAFDSKPVVN 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2146 538 Pfam Myb-like DNA-binding domain 332 390 - -
Lal1g2146 538 SUPERFAMILY Homeodomain-like 423 501 IPR009057 -
Lal1g2146 538 ProSiteProfiles Myb-like domain profile. 324 373 IPR001005 -
Lal1g2146 538 Coils Coil 96 116 - -
Lal1g2146 538 SMART sant 449 500 IPR001005 -
Lal1g2146 538 SMART sant 378 445 IPR001005 -
Lal1g2146 538 SMART sant 328 375 IPR001005 -
Lal1g2146 538 SMART sant 255 326 IPR001005 -
Lal1g2146 538 MobiDBLite consensus disorder prediction 192 229 - -
Lal1g2146 538 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 329 377 IPR017930 -
Lal1g2146 538 ProSiteProfiles Myb-like domain profile. 374 443 IPR001005 -
Lal1g2146 538 Gene3D - 372 447 - -
Lal1g2146 538 MobiDBLite consensus disorder prediction 192 236 - -
Lal1g2146 538 MobiDBLite consensus disorder prediction 91 105 - -
Lal1g2146 538 CDD SANT 331 373 IPR001005 -
Lal1g2146 538 ProSiteProfiles Myb-like domain profile. 445 498 IPR001005 -
Lal1g2146 538 PANTHER GB|AAC33480.1 28 537 - -
Lal1g2146 538 Gene3D - 333 371 - -
Lal1g2146 538 SUPERFAMILY Homeodomain-like 329 390 IPR009057 -
Lal1g2146 538 MobiDBLite consensus disorder prediction 35 180 - -
Lal1g2146 538 MobiDBLite consensus disorder prediction 113 166 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2146 326 499 MYB Transcription Factor Family AT4G32730 25.000 7.52e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal1g2146 Myb_DNA-bind_6 1.4e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2146 - - aprc:113872850 560.066