Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2143 ATGGCTGCCAATTTCTGGACATCATCTCACTACAAGCACCTTTTGGATCAAGAAGATGTGGATATGGTGAATCCACTTGACAAAGAAAAGGGTGTCACACTTGAGGATTTTAAGCTCATTAAGATCCACATGGCCAATTATATTTTGAAATTGGCTCAACAAGTAAAAGTGAGGCAGAGGGTTGTTGCCACTGCAGTTACATACATGAGGCGTGTTTACACCAGGAAGAGTTTGACTGAATATGATCCACGCCTGGTAGCTCCAACCTGCTTGTACCTGGCATCAAAAGCTGAAGAAAGCACAGTGCAGGCCCGGTTACTTGTATTTTACATTAAAAAATTATATGCTGATGATAAGTATAGGTGTGAAATCAAGGACATACTCGAAATGGAAATGAAGATTTTAGAAGCACTTAACTATTACCTGGTTGTATTCCACCCATACCGTTCACTATCGCAGTTGCTTCAGGATGCAGGTCTGAATGATATAAGCATGACTCAACTAACTTGGGGGATTGTAAATGACACATACAAGATGGACCTAATTCTTGTACATCCACCACATCTGATTGCTTTGGCTTGCATATACATTGCTAGTGTACTCAGAGATAAAGACACCACTGTTTGGTTTGAAGAACTTCGTGTTGATATGAACGTCGTTAAAAATATATCAATGGAGATACTTGATTTCTATGAAAGCAATAAAATGTTCACCGACGACAGAATCAATGCTGCTCTCCAGAAGCTAGCCTTGAGGCCCTGA 762 0.4029 MAANFWTSSHYKHLLDQEDVDMVNPLDKEKGVTLEDFKLIKIHMANYILKLAQQVKVRQRVVATAVTYMRRVYTRKSLTEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLYADDKYRCEIKDILEMEMKILEALNYYLVVFHPYRSLSQLLQDAGLNDISMTQLTWGIVNDTYKMDLILVHPPHLIALACIYIASVLRDKDTTVWFEELRVDMNVVKNISMEILDFYESNKMFTDDRINAALQKLALRP 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2143 253 Pfam Cyclin, N-terminal domain 43 142 IPR006671 -
Lal1g2143 253 SMART cyclin_7 149 229 IPR013763 -
Lal1g2143 253 SMART cyclin_7 46 136 IPR013763 -
Lal1g2143 253 PANTHER CYCLIN 4 248 IPR043198 GO:0006357|GO:0016538
Lal1g2143 253 SUPERFAMILY Cyclin-like 4 144 IPR036915 -
Lal1g2143 253 CDD CYCLIN 42 135 IPR013763 -
Lal1g2143 253 PIRSF Cyclin_C_H_G 1 253 - -
Lal1g2143 253 CDD CYCLIN 146 213 IPR013763 -
Lal1g2143 253 Gene3D - 19 143 - -
Lal1g2143 253 Gene3D - 7 239 - -
Lal1g2143 253 SUPERFAMILY Cyclin-like 146 237 IPR036915 -
Lal1g2143 253 PANTHER CYCLIN-C1-2-LIKE ISOFORM X1 4 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2143 Lal-Chr1 23496527 23504855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2143 60 199 Core Cell Cycle Gene Families AT5G27620 29.333 9.80e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2143 K15161 - gmx:100784345 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1540 9 17753202 17761638 Lal1g2143 1 23496527 23504855 LSH