Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal1g2130 | ATGGGTATTTCTAGGGATTCCATGCATAAGAGGCGTGCCACTGGTGGCAAAAAGAAGGCATGGAGAAAGAAGAGAAAGTATGAGCTTGGTCGTCAGCCTGCAAACACCAAGTTATCAAGCAACAAGACAGTTAGGAGGATCCGTGTTCGGGGTGGAAATGTCAAATGGAGGGCTTTAAGATTGGACACTGGAAACTTCTCATGGGGAAGTGAAGCCGTGGCCCGCAAGACTCGTCTTCTTGATGTTGTTTACAATGCCTCCAACAATGAGCTTGTGCGAACTCAGACCCTGGTCAAGGGTGCAATTGTTCAGGTTGATGCTGCTCCATTCAAGCAATGGTACCTTCAGCACTATGGTGTTGAAGTTGGCAGGAAAAAGAAAACAGCATCCAAGAAGGACACTGCAGAGGAAGGTGAAGCTGTAGCTGAAGAAGCTAAAAAAAGCAACCATGTCCAGAGAAAAATTGAGAATCGCCAGAAGGATCGTCAGCTTGACCCGCACATTGAAGAGCAGTTTGGTGGCGGCCGATTGCTTGCTTCTATTTCTTCTCGCCCAGGTCAATGCGGCAGGGCTGATGGGTACATTTTGGAAGGTAAGGAGCTAGAATTTTACGTGAAGAAACTCCAGAAGAAGAAGGGCAAGGGTGCTGCCTAA | 654 | 0.4771 | MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVARKTRLLDVVYNASNNELVRTQTLVKGAIVQVDAAPFKQWYLQHYGVEVGRKKKTASKKDTAEEGEAVAEEAKKSNHVQRKIENRQKDRQLDPHIEEQFGGGRLLASISSRPGQCGRADGYILEGKELEFYVKKLQKKKGKGAA | 217 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal1g2130 | 217 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Lal1g2130 | 217 | Pfam | Ribosomal protein S8e | 5 | 196 | IPR022309 | - | |
Lal1g2130 | 217 | Gene3D | - | 161 | 214 | - | - | |
Lal1g2130 | 217 | Gene3D | - | 32 | 160 | - | - | |
Lal1g2130 | 217 | PANTHER | 40S RIBOSOMAL PROTEIN S8 | 1 | 217 | - | - | |
Lal1g2130 | 217 | MobiDBLite | consensus disorder prediction | 11 | 26 | - | - | |
Lal1g2130 | 217 | ProSitePatterns | Ribosomal protein S8e signature. | 11 | 30 | IPR018283 | GO:0003735|GO:0005840|GO:0006412 | |
Lal1g2130 | 217 | CDD | Ribosomal_S8e_like | 5 | 196 | - | - | |
Lal1g2130 | 217 | PANTHER | 40S RIBOSOMAL PROTEIN S8 | 1 | 217 | IPR001047 | GO:0003735|GO:0005840|GO:0006412 | |
Lal1g2130 | 217 | MobiDBLite | consensus disorder prediction | 125 | 167 | - | - | |
Lal1g2130 | 217 | TIGRFAM | eS8: ribosomal protein eS8 | 1 | 198 | IPR001047 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal1g2130 | Lal-Chr1 | 23398093 | 23400752 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal1g2130 | 1 | 205 | Cytoplasmic Ribosomal Protein Gene Family | AT5G59240 | 83.010 | 5.00e-123 | 345 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal1g2130 | K02995 | - | gmx:100500112 | 369.777 |