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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Lal1g2129
ATGGAAAATCAATTTTTTCTCAATCCTCAAATGTGGCAATCCTCAAATGTTGAAGCAATTATGAATAATTTTCCTTCTAAGGAAACCCAAGATTGCTTTTACAAATGGGATAAATCAAATGATCAAAATCTTCAATTTGATTCATCACTTAGTTCAATTGTATCTTCCCCTTCAGCTTCAAATTCCAACATGTCAAATGATAATTTTGTCATAACAGAACTCATAGACAAATTAGGAAACATTGGTGGTAGTGTTACAACTAATAATAACAACACTAACACTTCATGTTATAACACCCCTTTGAGTTCTTCACCTAAGATCAACAATAATAACCACTTTGAGAAACCAATTATGGCATTGAATTCTTCAACTGTGGCTGAGTTTTTAGCTGATCCTGGTTTTGCTGAAAGGGCTGCAAAGTTTTCTTGCTTTGGAAGTAGAAGTTTCAATGATAGGAGAACACAATTGGGGTTGAAGAAAAATGCTGAATTGTCTCAAAGATCTAATCTTTTGATGGAAAATGGAAAACTCACTAGAGTTTCAAGCACTCCATCACTTAAAGTTCTTGGAATTGGATCTCAAATGGGTATTCAAGATAACAAGAATACTTCAATGGAAGTTGCTACTTCTCAAGAGGAATCTACAATCTCTGAACAAACTATGAATGGAGACAATGGAGTTATCAAACCTTCCTCTTATATGAGTTCAAGGAAAAGAAAAGGTTCTTCTTCTAAAGGAAAAACCAAAGAAACTTCAACCATTATCAATCATGCCATGAGTGCTGAAGCTAGTGAAGACTCAAATGTGAAACGTTACAAGGCAAATGATGGAAATTTGAAGGAAGAGAAAGAATACAAAGAGGATGAGAAAGAGAAGAAGAGTAACTCAAAACCTCCTGAGCCACCAAAGGATTACATTCATGTTAGAGCAAGAAGAGGTCAAGCTACTGATAGCCATAGTCTTGCAGAACGAGTAAGGAGAGAGAAAATCAGTGAAAGGATGAAGCTTCTTCAAGATCTTGTACCAGGTTGTAATAAGGTAACTGGAAAAGCACTTATGCTAGATGAAATTATAAACTATGTTCAGTCATTACAACACCAAGTTGAGTTCCTTTCTATGAAATTGGCTACTGTTAACACCAGGCTGGATTTTAATATTGAGAGTCTAATCTCAAAAGATGTATATCAATCAAATGATTCCTTGGCACATCCAATATTCCCACTAGATTCCTCAGCACAAGGCTTTTATGGGCAACAACAGCCCCAAAACTCAGCAATCTACAATAACATTCCTAATGGAACATTGTCTCACAGTTCAATGGACCCATTAGATAGTACTACTCTATGCCAAAACATTGCTATGCAGTTACCCTCCCTTAATGGATTTAATGAAGGTGGCTCTCAGTGTCCAGTAGCATTCTCTGAGGAAGATCTTCAAACTATTGTTCAAATGGGTTTTGGCCAAACTTCAAATAGGAAATCACCACAATCCCTGAATTTTAATGGCTCAAATCAAGTACATCTATGA
1527
0.3589
MENQFFLNPQMWQSSNVEAIMNNFPSKETQDCFYKWDKSNDQNLQFDSSLSSIVSSPSASNSNMSNDNFVITELIDKLGNIGGSVTTNNNNTNTSCYNTPLSSSPKINNNNHFEKPIMALNSSTVAEFLADPGFAERAAKFSCFGSRSFNDRRTQLGLKKNAELSQRSNLLMENGKLTRVSSTPSLKVLGIGSQMGIQDNKNTSMEVATSQEESTISEQTMNGDNGVIKPSSYMSSRKRKGSSSKGKTKETSTIINHAMSAEASEDSNVKRYKANDGNLKEEKEYKEDEKEKKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLSMKLATVNTRLDFNIESLISKDVYQSNDSLAHPIFPLDSSAQGFYGQQQPQNSAIYNNIPNGTLSHSSMDPLDSTTLCQNIAMQLPSLNGFNEGGSQCPVAFSEEDLQTIVQMGFGQTSNRKSPQSLNFNGSNQVHL
508
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Lal1g2129
508
SMART
finulus
320
370
IPR011598
GO:0046983
Lal1g2129
508
MobiDBLite
consensus disorder prediction
207
239
-
-
Lal1g2129
508
PANTHER
BHLH TRANSCRIPTION FACTOR
19
505
-
-
Lal1g2129
508
SUPERFAMILY
HLH, helix-loop-helix DNA-binding domain
312
383
IPR036638
GO:0046983
Lal1g2129
508
MobiDBLite
consensus disorder prediction
488
508
-
-
Lal1g2129
508
PANTHER
STEROL REGULATORY ELEMENT-BINDING PROTEIN
19
505
IPR024097
GO:0006355
Lal1g2129
508
MobiDBLite
consensus disorder prediction
207
322
-
-
Lal1g2129
508
CDD
bHLH_AtBPE_like
304
389
-
-
Lal1g2129
508
MobiDBLite
consensus disorder prediction
247
263
-
-
Lal1g2129
508
Pfam
Helix-loop-helix DNA-binding domain
318
365
IPR011598
GO:0046983
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Lal1g2129
Lal-Chr1
23383697
23387283
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Lal1g2129
1
475
Basic Helix-Loop-Helix Transcription Factor Gene Family
AT3G07340
43.687
7.36e-100
306
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
bHLH
Lal1g2129
HLH
3.9e-06
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Lal1g2129
-
-
gmx:100812081
572.778
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Lal2g1740
2
19755181
19758709
Lal1g2129
1
23383697
23387283
LSH
Lal1g2129
1
23383697
23387283
Lal14g0190
14
2122638
2125302
PCT
Lal14g0190
14
2122638
2125302
Lal1g2129
1
23383697
23387283
PCT
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