Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2121 ATGGCCAACTTTTTTTTGGCTTTACTTACAATTTCATTGAGCTTTGTGCTGACCCAATCAGCACCTAAAAGTTCTCTCATTAGACATGTTCCAGGTTTCAATGGCACTCTCCCTTCCAAACATTATGCTGGTTACGTGGCAGTGGATAAAAGTCACCAAAAGAACTTGTTCTACTATTTTGTTGTATCAGAAGGTCAACCATCTAAGGATCCAGTGGTTCTATGGCTTAATGGTGGACCAGGGTGCTCTAGCTTTGATGGCTTCGTATATGAACATGGCCCTTTCAATTTTAAAAAACCAAAGACTAAGGGAAGTTTACCTAGGTTGCAACTCAATCTATACAGTTGGTCAAAGGCTTCCAATATCATATATTTGGATTCACTTGCTGGAGTGGGTTTTTCATACTCAAAGAATGAATCTGATTATTATACTGGAGATGCACAAACTGCCAAGGATACACATGTCTTTCTCCTTAAGTGGTTTAAGCTATACCCTGAGTTCCTTCAAAATCCATTATTCCTTAGTGGAGAATCATTTGCTGGAGTTTATGTGCCTACACTTGCTCATGAAATAGTTAAAGGACTTGATGCTGGTACAAAGCCGAAGCTGAATTTCAAGGGTTACATGATTGGAAATCCAGTTACAGATGAAGAGTTTGATGGCAATGCTATGGTTCCATTTGCACATGGAATGGGACTTATTAGTGATCAGATTTTTGAGGAAACCAGAAAGAAATGCCAAGGGCACTACTATGGTGTCACCGATAAAATATGCTTTAATATGCTTGCAAAAGTGGAGAAGGCTGTTGCAAGCTTAAACATCTATGACATTCTAGAACCATGTTATCATGACCCAGAGACAAAGGGGAATGCAACATCTGATAACAATTTGCCACTTAGCTTTCGAAAATTGGGTGAGACGGAAAAACCTCTACCGGTTAGAAAAAGAATGTTTGGTCGTGCTTGGCCCCTAGGAGCTCCTGTGAAACCTGGAATTGTTCCAACTTGGCCAGAACTTAGTGTTAGCAGCAATGTTCCATGCATAAATGATGAGGTGGCAACTGAATGGTTGAACAATGAAGCTGTCAGGAAAGCAATTCACACAGTCGAGAAAAGTGTGGTCAGTGATTGGAAATTATGCACAAACACTATTGTATACGATCATGAGGCAGGGAGTATGATCAAATACCACAAAGAACTAACTTCTAAAGGATACCGAGCACTTATATTCAGTGGAGATCATGACATGTGTATTCCATATACTGGGTCTGAAGCATGGACAAGATCAATGGGATATAACATTGTTGATGAATGGAGGCCTTGGTTTGTCAATCATCAAGTTGCTGGGTATATACAAGTATATGACAAAAATCTTACTTTCATGACCATAAAGGGAGCTGGACATACTGTTCCAGAATATAAACCGCGAGAGTCTTTGTATTTTTATAAACATTTTTTGAATGGAATTCCTATATAA 1476 0.3916 MANFFLALLTISLSFVLTQSAPKSSLIRHVPGFNGTLPSKHYAGYVAVDKSHQKNLFYYFVVSEGQPSKDPVVLWLNGGPGCSSFDGFVYEHGPFNFKKPKTKGSLPRLQLNLYSWSKASNIIYLDSLAGVGFSYSKNESDYYTGDAQTAKDTHVFLLKWFKLYPEFLQNPLFLSGESFAGVYVPTLAHEIVKGLDAGTKPKLNFKGYMIGNPVTDEEFDGNAMVPFAHGMGLISDQIFEETRKKCQGHYYGVTDKICFNMLAKVEKAVASLNIYDILEPCYHDPETKGNATSDNNLPLSFRKLGETEKPLPVRKRMFGRAWPLGAPVKPGIVPTWPELSVSSNVPCINDEVATEWLNNEAVRKAIHTVEKSVVSDWKLCTNTIVYDHEAGSMIKYHKELTSKGYRALIFSGDHDMCIPYTGSEAWTRSMGYNIVDEWRPWFVNHQVAGYIQVYDKNLTFMTIKGAGHTVPEYKPRESLYFYKHFLNGIPI 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2121 491 Gene3D alpha/beta hydrolase 19 316 IPR029058 -
Lal1g2121 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Lal1g2121 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Lal1g2121 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Lal1g2121 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 458 471 IPR001563 GO:0004185|GO:0006508
Lal1g2121 491 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 12 488 - -
Lal1g2121 491 Gene3D - 343 490 - -
Lal1g2121 491 SUPERFAMILY alpha/beta-Hydrolases 27 490 IPR029058 -
Lal1g2121 491 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 488 IPR001563 GO:0004185|GO:0006508
Lal1g2121 491 Pfam Serine carboxypeptidase 31 488 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2121 Lal-Chr1 23293963 23301438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2121 352 491 Calmodulin-binding Proteins AT2G22960 45.000 4.64e-40 141