Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2115 ATGGCCAAGTATACTTCCATTTTCTTTTGTGTTTCTTTCATTTTGGCCTGCACATTTTTTCCAAAGTGTGATGCTAGTGATGATAATCCAAAACTTCATATTGTGTATATGGGCTCACTTCCTAAGACACAGTATTCCCCAACCTCACACCATTTAAGCGTTTTGCAACAAGTCTTTGATGGCAATGATGCAACAAATTCCTTAATTCGCAGTTATAAGAGAAGTTTCAATGGGTTTGCTGCCATGCTCACACATCAGCAAAAGGAAATGCTTTCTCAAATGGAAGGTGTAGTCTCAGTTTTCCCAAGCAGAAAAGTTCAACTACACACAACTCGATCATGGGACTTCATTGGATTTCCAGAGTCAGTGAAACGAAGTCTTGCCGTAGAGAGTGATGTTGTTGTTGGAGTTATTGACACCGGTATATGGCCTGAATCGGATAGTTTCAATGATCAAGGTTTTGGTCCAATTCCAAAAAATTGGAAGGGTACTTGTGCTGGTGGTAAGAACTTTACTTGCAATAAGAAAATTATCGGTGCGAGATTCTATGCAAGTGAGTCTACTAGAGACATTGATGGGCATGGAACCCATACTGCATCAACAGTTGTCGGAAACAATGTTTTAGGTGCAAGCTTCTATGGACTAGCACAAGGTACTGCTAGAGGGGGTGTCCCATCAGCAAGAATTGCTGCATATAAAGTATGTAATGAATCAGGATGCACCAATGATGCTATCATGGCTGCTTTCGATGATGCCATAGCTGATGGTGTAAGCATCCTTTCAGTTTCACTAGGTGGTTCTAACATAGTTCCATTTGATGAAGATCCTATTGCAATTGGTTCATTCCATGCTATGGAAAGAGGGATACTAACAGTGAATTGTGCAGGCAATAACGGTCCATTTCCGAGAACTGTTTCGAGTGTAGCACCGTGGATGATTACTGTAGCTGCAAGTACAATAGACCGAAGATTCATTGACAAGGTAATTTTAGGGAATGGAAAAACACTAATAGGTAGATCAATAAATTCTTTCTCATCAAATGGGACAAAGTTTCCCATTGCTAAGAAAAATGGCAATTCAACAAAATGTTTAGAAGATCGTGCTAATATATGCGAATGTTTAGATAGTCATTTGGTGAAAGGAAAGATAGTTTTATGTGGAAATAGAGCAAATCCTAGTTATAATGGTGGGCACCCAATTGGTTCAATCATAAAGGAATTTAGCATTGGTGAAACAAACTTTATCACTCCATTACCTTCATTGGTTTTATCTTCCATTGAGTATGAACAATTGAAATCATACATGAATTCAACAAATATTCCAAAAGCAGAAATATTAAAGAGTGAGACAATTAAAGACACTAATGCTCCTACGGTAGCTGATTTTTCTTCACGTGGGCCAAATACAATTGTTTCGGAAATTTTGAAACCAGATATAAGCGCCCCGGGAGTGGATATTCTAGCTTCATTTTCACCAGATGCTTCTCCTTCAGGAAAAACTTTTGATAAACGATCTGCAAAATATAGCATAATATCAGGGACATCCATGTCATGCCCCCATGTTGCCGGAATAGCTGCATATTTGAAAACATTTCATCCCGATTGGTCACCAGCAGCCATCAAATCTGCTATTATGACTTCAGCAAAAACTATGAAGGTTTCAGAGGATGATGTTGGTGAATATGCTTATGGATCTGGCCATGTCAATCCTATTTCAGCTATTCATCCTGGACTTGTCTATGACATTTCCTTAGAAGATTATATACAAATGCTTTGCAACTTGGGTTATCATAACCAAAAGGTTAAATTAATCTCTGGAAAGAATAATGCTTGCTCCAAAGCTACTCATAGATCCTCGGTTAGAAATCTAAATTATCCTGCTCTTGCTATTGATGTTGAGTCAATGACATCTTTTACCATAAAGTTTAAAAGAACAGTCACAAATGTTGGCCTAGCAAACTCAACTTATAAGGCAACAATTTTACCAAATCCAGGAATCAAAGTTTCAGTAGTACCCGAGACATTATCGTTCAAATCACTTCATGAGAAGCATTCTTTTGTCGTCACTATCACCGGTGATAAACCAGAACAACATGTGCTCACTTCATCATTGTTATGGTCAGATGGCACCCACAATGTGAGGAGTCCAATTGTCGTAAATGTTTTGGATTAG 2172 0.3831 MAKYTSIFFCVSFILACTFFPKCDASDDNPKLHIVYMGSLPKTQYSPTSHHLSVLQQVFDGNDATNSLIRSYKRSFNGFAAMLTHQQKEMLSQMEGVVSVFPSRKVQLHTTRSWDFIGFPESVKRSLAVESDVVVGVIDTGIWPESDSFNDQGFGPIPKNWKGTCAGGKNFTCNKKIIGARFYASESTRDIDGHGTHTASTVVGNNVLGASFYGLAQGTARGGVPSARIAAYKVCNESGCTNDAIMAAFDDAIADGVSILSVSLGGSNIVPFDEDPIAIGSFHAMERGILTVNCAGNNGPFPRTVSSVAPWMITVAASTIDRRFIDKVILGNGKTLIGRSINSFSSNGTKFPIAKKNGNSTKCLEDRANICECLDSHLVKGKIVLCGNRANPSYNGGHPIGSIIKEFSIGETNFITPLPSLVLSSIEYEQLKSYMNSTNIPKAEILKSETIKDTNAPTVADFSSRGPNTIVSEILKPDISAPGVDILASFSPDASPSGKTFDKRSAKYSIISGTSMSCPHVAGIAAYLKTFHPDWSPAAIKSAIMTSAKTMKVSEDDVGEYAYGSGHVNPISAIHPGLVYDISLEDYIQMLCNLGYHNQKVKLISGKNNACSKATHRSSVRNLNYPALAIDVESMTSFTIKFKRTVTNVGLANSTYKATILPNPGIKVSVVPETLSFKSLHEKHSFVVTITGDKPEQHVLTSSLLWSDGTHNVRSPIVVNVLD 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2115 723 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 32 721 - -
Lal1g2115 723 Pfam Subtilase family 131 566 IPR000209 GO:0006508|GO:0008236
Lal1g2115 723 Gene3D - 591 722 - -
Lal1g2115 723 SUPERFAMILY Subtilisin-like 112 574 IPR036852 GO:0004252|GO:0006508
Lal1g2115 723 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Lal1g2115 723 PRINTS Subtilisin serine protease family (S8) signature 190 203 IPR015500 -
Lal1g2115 723 PRINTS Subtilisin serine protease family (S8) signature 512 528 IPR015500 -
Lal1g2115 723 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Lal1g2115 723 ProSiteProfiles Serine proteases, subtilase domain profile. 113 574 - -
Lal1g2115 723 ProSitePatterns Serine proteases, subtilase family, serine active site. 513 523 IPR023828 -
Lal1g2115 723 Gene3D Peptidase S8/S53 domain 132 587 IPR036852 GO:0004252|GO:0006508
Lal1g2115 723 Pfam Peptidase inhibitor I9 33 109 IPR010259 -
Lal1g2115 723 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 109 IPR037045 -
Lal1g2115 723 Gene3D - 321 452 - -
Lal1g2115 723 CDD PA_subtilisin_like 328 445 - -
Lal1g2115 723 CDD Peptidases_S8_3 106 548 IPR034197 -
Lal1g2115 723 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 721 IPR045051 -
Lal1g2115 723 Pfam Fibronectin type-III domain 622 719 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2115 Lal-Chr1 23271844 23274015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2115 31 722 Subtilisin-like Serine Gene Family AT5G59100 55.007 0.0 787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2115 - - lang:109341651 942.569