Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2114 ATGGCCTGGTATAGTTCCCTCATCTTATGTGTCTCTTTCATTTTGGCATGCACAATTTTCTCAAAGTGTGATGCTAGTGAAGATAATCCAAAACTACATATTGTGTATATGGGCTCACTTCCTAATACATCATATTCTCCAACCTCTCACCATTTAAGCATGTTGCAACAAGTCTTTGATGAAAATGATGCAACAAATTCCTTAATCCATAGTTACAAGAGAAGTTTCAATGGGTTTGCTGCAATGCTCACTAATCAACAAAAGGAAAAGCTTTCTCAAATGGAAGGTGTAGTCTCAGTTTTCCCAAACAGAAAACTCCAATTACACACAACTCGATCATGGGACTTCCTAGGACTTGTTAAGTCAGTCAAACGAAGTCGTGCTAAAGAGAGTGATGTTGTTGTTGGAGTGTTGGACACAGGTATATGGCCCGAATCTGATAGCTTCAAAGATAAAGGTTTCGGTCCTATTCCAAAACATTGGAAGGGTGCTTGTTCCGGTGGTTATAACTTTACTTGTAATAAGAAGATCATTGGTGCAAGATATTATACAGAGGATAAGACTGCAAGAGACGCTGGCGGACATGGAACACATACAGCATCAACAGCAGCTGGAAACTATGTTCCTAGTGCAAGCTTTTACGGACTTGCACAAGGTACTGCAAGAGGTGGAGTCCCATTAGCAAGAATTGCTGCATATAAAGTATGTGATGAAACAGAATGTTCTAGTAGTGCTATCATGTCTGCTTTCGATGATGCCATAGCTGATGGTGTAAACTTCATTTCACTTTCACTAGGAGGTTCTTTCCAAAATCCATTCGACGAAGATACTCTCGCGATTGGTTCATTTCATGCTATGGCAAAAGGGATACTCACAGTGAATTCTGCAGGCAATAGCGGTCCTTCTCCAACTTCTGTTTCGAGTGTTGCGCCATGGATGTTTACAATCGCTGCAAGTACAATAGACCGAAAATTCATTGATAAGGTAGTTCTTGGGAATGGAAAAACACTAACCGGTATATCTATAAATTCTTTCTCATTAAATGGAACAAAGGCTCTCATTGCTAAGAAAAATGGTGGGTCAGGATCAACAACATGCCCAGAGCAAGATCCTAATGCATGCAACTGTTTAGATAGTAGTTTGGTAAAAGGAAAGATAATTTTATGTGATGAAACTGGCTCTGTAGATTATCCATCTGGGAACCCAATAGGTTCAATCATACATGATCCTACGAAAGGTTCACCAGCTTTTGTCACTCCATTACCTTCATTGATGTTACCTTCCATTCAGTATCAACAATTGAAATCATACACGAATTCAACAAAAATTCCAAAAGCTGAGATATTAAAGAGTGAAATAATTAAAGATATTAGTGCTCCTAAGGTAGCTGATTTTTCTTCACGTGGGCCAAATACAATTGTTCCAGAAATTATGAAACCAGATATAACTGGCCCAGGAGTGGATATCTTGGCTTCATTTTCACCAGTTGCTCCTCCTTCAAGTATAACTTACGATAAAAGATCTACAAAATATAACATAATATCAGGAACATCCATGTCATGCCCCCATATTACTGGAATAGCTGCATATTTAAAATCATTTTATTGGGATTGGTCACCAGCAGCCATCAAATCTGCTCTTATGACTTCAGCAAAACCTTTGAAAGGTTCTAAGAATGATGTTGGTGAATATGCTTATGGATCCGGCCATGTCAATCCTATTTCAGCTGTTCATCCTGGACTTGTCTATGACATTTCCGTGGATGATTATATACAAATGCTTTGCAACTTGGGTTATGATAACGAAAAGGTTAAAGTAATATCTGGAAAGAGCAATGCTTGTTCCAAAGCTACTCATAGATCCTTGGTGAGAAATCTAAATTATCCTGCTCTTGCTATTGCTGTTAATTCAACGACATCTTTTACTATCAAGTTTAAAAGAACAGTCACAAATGTTGGCCTAGCAAAGTCAATATATAAGGTGGCAGTCACACCAAATCCAAAAATCAAAATTACGGTGGTTCCTAATACTTTGTCGTTCAAATCACTTCACGAGAAGAAGTCTTTTGTTGTCACTGTCACTGGTGGTAAGTTACCTTTACAAACTGTCACTTCATCATTGACATGGTCTGATGGCATCCACCACGTGAGGAGTCCAATTGTTGTAGATATTTTATAA 2178 0.3838 MAWYSSLILCVSFILACTIFSKCDASEDNPKLHIVYMGSLPNTSYSPTSHHLSMLQQVFDENDATNSLIHSYKRSFNGFAAMLTNQQKEKLSQMEGVVSVFPNRKLQLHTTRSWDFLGLVKSVKRSRAKESDVVVGVLDTGIWPESDSFKDKGFGPIPKHWKGACSGGYNFTCNKKIIGARYYTEDKTARDAGGHGTHTASTAAGNYVPSASFYGLAQGTARGGVPLARIAAYKVCDETECSSSAIMSAFDDAIADGVNFISLSLGGSFQNPFDEDTLAIGSFHAMAKGILTVNSAGNSGPSPTSVSSVAPWMFTIAASTIDRKFIDKVVLGNGKTLTGISINSFSLNGTKALIAKKNGGSGSTTCPEQDPNACNCLDSSLVKGKIILCDETGSVDYPSGNPIGSIIHDPTKGSPAFVTPLPSLMLPSIQYQQLKSYTNSTKIPKAEILKSEIIKDISAPKVADFSSRGPNTIVPEIMKPDITGPGVDILASFSPVAPPSSITYDKRSTKYNIISGTSMSCPHITGIAAYLKSFYWDWSPAAIKSALMTSAKPLKGSKNDVGEYAYGSGHVNPISAVHPGLVYDISVDDYIQMLCNLGYDNEKVKVISGKSNACSKATHRSLVRNLNYPALAIAVNSTTSFTIKFKRTVTNVGLAKSIYKVAVTPNPKIKITVVPNTLSFKSLHEKKSFVVTVTGGKLPLQTVTSSLTWSDGIHHVRSPIVVDIL 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2114 725 ProSitePatterns Serine proteases, subtilase family, serine active site. 516 526 IPR023828 -
Lal1g2114 725 Pfam Peptidase inhibitor I9 33 109 IPR010259 -
Lal1g2114 725 SUPERFAMILY Subtilisin-like 119 577 IPR036852 GO:0004252|GO:0006508
Lal1g2114 725 CDD PA_subtilisin_like 329 448 - -
Lal1g2114 725 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Lal1g2114 725 PRINTS Subtilisin serine protease family (S8) signature 191 204 IPR015500 -
Lal1g2114 725 PRINTS Subtilisin serine protease family (S8) signature 515 531 IPR015500 -
Lal1g2114 725 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 109 IPR037045 -
Lal1g2114 725 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 723 IPR045051 -
Lal1g2114 725 Gene3D Peptidase S8/S53 domain 132 590 IPR036852 GO:0004252|GO:0006508
Lal1g2114 725 Pfam Subtilase family 131 559 IPR000209 GO:0006508|GO:0008236
Lal1g2114 725 Pfam Fibronectin type-III domain 625 722 IPR041469 -
Lal1g2114 725 Gene3D - 594 724 - -
Lal1g2114 725 Gene3D - 322 455 - -
Lal1g2114 725 CDD Peptidases_S8_3 106 551 IPR034197 -
Lal1g2114 725 ProSiteProfiles Serine proteases, subtilase domain profile. 113 577 - -
Lal1g2114 725 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 32 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2114 Lal-Chr1 23262149 23264326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2114 31 722 Subtilisin-like Serine Gene Family AT5G59100 52.684 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2114 - - lang:109341651 1075.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g2114 1 23262149 23264326 Lal1g2114 1 23262149 23264326 ECH