Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2108 ATGAAACAAGTCTTTGTTGGAAATGATGCAATAAATTCTTTAATCCACAGTTACAAGAGAAGTTTCAATGGGTTTGTTGCAATGCTCACTAATCAGCAAAAGGAAAAGCTTTCTCATATGGAAGGTGTAGTTTCAGTTTTCCCAAGCAGAAATCTCCAATTACACACAACTCGGTCATGGGACTTCCTTGGACTTACTAAGTCAGTCAAACGAAGTCATGCTATAGAGAATGATGTTGTGGTTGGAGTTCTTGACACCGGTATATGGCCCGAATCTGATAGTTTCAAAGATGAAGGTTTTGATTTTATCCCTAAACATTGGAAGGGTGCTTGTGATGGTGGTACGAACTTTACTTGCAATAAGAAGATCATCGGTGCTAGATATTATATAGATAACTCTGCCAGAGACACTATCGGACATGGAACACATACCGCATCAGTAGTTGCTGGAAACAATGTTCCCAGTGCAAGCTTTTATGGACTTGCACAAGGTACTGCTAGAGGTGGAGTCCCGTTAGCAAGAATTGTTGCGTATAAAGTATGTAATGAATTAGGATGTCAAAGTAATGATATATTGTCAGCATTTGATGATGCCATAGCTGATGGCGTAAACATCATTTCAATTTCACTAGGAGGTTATTCCCAATCATATTTTGATGAAGATCCTGTCGCGATTGGTTCATTTCATGCTATGGCAGGAGGGATACTCACAGTGAATTCTGCAGGCAATTACGGTCCTTCTCCAGCCTCTCTTTCGAGTGTAGCGCCATGGATGCTTACTGTAGCGGCAAGTACAATAGACCGAAGATTCATTGACAAGATAGTTCTTGGGAACGGAAAAACACTGACAGGTATATCTATAAATTCTTTCACGTTAAATGGAACAAAGTTTCCAATTGCTAAGAAAAATAGTGGTTCAGGATGTTTTGAAGAAAATGCTAAGGTAGGTAGTTCTTGCAACTGTTTAGAGGATAGTTTGGTGAAGGGAAAGATAATTTTATGCAATGGGATGAACAATATAAATTATTTTAGTGCGACTCCAATCGGTTCAATCATACAATATCCTCATAAGGGTTCACCAGCATTAGTCACTCCATTACCTTCATTGATGTTATCTGAAATTGAGTATCAATTTTTGAAATCCTACATAGATTCAACAAACAATCCAGTAGCTGAAATACTAAAGAGTGAGACAATTATAGACAATAATGCTCCTATGGTAACTGATTTTTCGTCACGTGGGCCAAATATAATTACTCCAGAAATTTTGAAACCAGATATAAGTGCCCCAGGAGTGGACATCTTGGCTTCATTTTCACCAGTTGTTTCTCCATCAAGAGATGAAACTGATAAAAGATCTGCAAAATATAACATAATATCAGGAACATCAATGTCATGCCCTCATGTTTCTGGAATAGCTGCATATTTGAAAACATTTCATTTGGATTGGTCACCGGCAGCCATCAAATCCGCTCTTATGACCACAGCACAAACTATGAAGGGTTCTATAGATGATATTGGTGAATATGCTTATGGATCTGGCCATGTCAATCCTATTCCAGCTATTAATCCCGGACTTGTCTATGACATTTCCTTAGAAGATTATATACAAATGCTTTGCAACATGGGTTATGATAGTGGCAAGGTTAAATTAATCTCCGGGAAAAATGATGCTTGCATCAATGCCTCTGACAGATCCTTAGTGAGAAATCTAAATTATCCTGCGCTTGCTATTAATGTTGAGCCTATGACATCTTTTACCATAAAGTTTAGTAGAACGGTCATGAATGTTGGCCTACCAAACTCAACTTATAAGGGATCAATTTTACCAAATCCAAGAATCGAAGTTATAGTGGTACCCAAAATTTTATCCTTCAAATCACTACATGAGAAGCAATCTTTTGTGGTCACGGCCACTGGTGGTAAATTACCAAAAGAAACTGTACTCACATCAGCATTGTTGTGGTCAGATGGCACCCATAATGTTAGGAGTCCAATTGTTATAAATATTTCTGAATAG 2019 0.3794 MKQVFVGNDAINSLIHSYKRSFNGFVAMLTNQQKEKLSHMEGVVSVFPSRNLQLHTTRSWDFLGLTKSVKRSHAIENDVVVGVLDTGIWPESDSFKDEGFDFIPKHWKGACDGGTNFTCNKKIIGARYYIDNSARDTIGHGTHTASVVAGNNVPSASFYGLAQGTARGGVPLARIVAYKVCNELGCQSNDILSAFDDAIADGVNIISISLGGYSQSYFDEDPVAIGSFHAMAGGILTVNSAGNYGPSPASLSSVAPWMLTVAASTIDRRFIDKIVLGNGKTLTGISINSFTLNGTKFPIAKKNSGSGCFEENAKVGSSCNCLEDSLVKGKIILCNGMNNINYFSATPIGSIIQYPHKGSPALVTPLPSLMLSEIEYQFLKSYIDSTNNPVAEILKSETIIDNNAPMVTDFSSRGPNIITPEILKPDISAPGVDILASFSPVVSPSRDETDKRSAKYNIISGTSMSCPHVSGIAAYLKTFHLDWSPAAIKSALMTTAQTMKGSIDDIGEYAYGSGHVNPIPAINPGLVYDISLEDYIQMLCNMGYDSGKVKLISGKNDACINASDRSLVRNLNYPALAINVEPMTSFTIKFSRTVMNVGLPNSTYKGSILPNPRIEVIVVPKILSFKSLHEKQSFVVTATGGKLPKETVLTSALLWSDGTHNVRSPIVINISE 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2108 672 Gene3D Peptidase S8/S53 domain 78 535 IPR036852 GO:0004252|GO:0006508
Lal1g2108 672 ProSiteProfiles Serine proteases, subtilase domain profile. 59 522 - -
Lal1g2108 672 Pfam Subtilase family 77 504 IPR000209 GO:0006508|GO:0008236
Lal1g2108 672 CDD Peptidases_S8_3 52 496 IPR034197 -
Lal1g2108 672 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 7 670 - -
Lal1g2108 672 Gene3D - 267 400 - -
Lal1g2108 672 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 55 IPR037045 -
Lal1g2108 672 CDD PA_subtilisin_like 274 393 - -
Lal1g2108 672 Pfam Peptidase inhibitor I9 10 55 IPR010259 -
Lal1g2108 672 ProSitePatterns Serine proteases, subtilase family, serine active site. 461 471 IPR023828 -
Lal1g2108 672 Pfam Fibronectin type-III domain 570 668 IPR041469 -
Lal1g2108 672 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 7 670 IPR045051 -
Lal1g2108 672 PRINTS Subtilisin serine protease family (S8) signature 76 95 IPR015500 -
Lal1g2108 672 PRINTS Subtilisin serine protease family (S8) signature 136 149 IPR015500 -
Lal1g2108 672 PRINTS Subtilisin serine protease family (S8) signature 460 476 IPR015500 -
Lal1g2108 672 Gene3D - 539 671 - -
Lal1g2108 672 SUPERFAMILY Subtilisin-like 60 523 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2108 Lal-Chr1 23216033 23218051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2108 3 668 Subtilisin-like Serine Gene Family AT3G46850 52.276 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2108 - - lang:109341651 963.37