Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2106 ATGATGCAAGAAGTCTTTAATGACGATGATGCAACAAATTCCTTAATCCAAAGTTACCAAAGAAGTTTCAATGGGTTTGCTGCCATGCTCACTAATCAGCAAAAGGAAAAGCTTTCTCAGATGGAAGGTGTAGTCTCAGTTTTCCCAAGTAGAAAATTCCAACTACAAACAACTCGGTCATGGGACTTCCTTGGACTCCCCAAGTCAGTCAATCGAAGTCCTGCCAAAGAGAGTGATGTTGTGGTTGGAGTTCTTGACACTGGTATATGGCCTGAATCTGATAGTTTCAATGATCAAGATTTTGGACCTGTTCCAAAACATTGGAAGGGTGTGTGTGCAGGTGGTACGAACTTTACTTGCAATAAAAAGATCATTGGTGCCAGATATTATACAGATAAGTCTGCGAGAGACTTGAATGGACATGGGACACATACTGCATCAACAGCTGCTGGAAACTATGTTCCTAGTGCAAGCTTTTATGGACTTGCACAAGGTACTGCTAGAGGTGGAGTCCCATTAGCAAGAATAGCAACATATAAAACATGTAATGAATTAGGATGTGATGGTGCTGCTATCTTGTCTGCTTTTGATGATGCCATAGCTGATGGCGTAAACATCATTTCAGTTTCACTAGGAGGTTCTTCCCAATTACCTTTCCATCAAGATCCTATCGCGATTGGTTCATTTCATGCTATGAAAAGAGGGATACTCACAGTGAATGCTGCAGGCAATAGCGGTCCACGTCCAACCTCTTCTTCTAGTGTAGCACCGTGGATACTTACTGTAGCTGCAAGTACAATAGATCGAAAGTTCATTGACAAAGTAGTTCTAGAGAATGGAAAAACACTAACAGGTATATCAATAAATTCTTTCACATTTAATGGAACACAAATTCTCATTGCTAAAAAAAATGGCGGTCCAAAATGTTTAGAAGAAAATGCTAATGCATGCAACTGTTTCGATAGTAATTTGGTGGATGGAAAAATAATTTTATGCGATAAAGGTCATGGAATTTTAGGGGAAGATTATGACAGTGTGAACCCAGCTGGTATAATCATACAATCTCGTCGTAAAGGTTTACCAGCGTTTGTCGAACCATTACCTTCGTTGTCATTATCTGAAACTGACTTTCAACTTTTGAAATCCTACGTGAATTCAACAAACAATCCTAAAGCTGAAATACTAAAGAGTGAGACAGTTACAGATGATAATGCTCCTATGATAATTGGTTTTTCTTCACGTGGGCCTAATACAATTGCTCCAGAAATTTTGAAACCAGATATAAGCGCCCCAGGAGTGGATATCTTGGCTTCATTTTCACCGGCTGCTTCTCCGTCAGGTATTAAAATTGATAAAAGATCTGTAAAATATAACATAATATCAGGAACATCCATGGCATGCCCCCATGTCTCTGGAATTGCTGCATATTTGAAAACATTTCATTTGGATTGGTCACCGGCAGCCATCAAATCTGCTCTTATGACTTCAGCACAACCTATGAAGGGTTCTGAGGATGAAATTGGTGAATATGCTTATGGATCGGGTCATGTCAATCCTATTCCGGCTACTAATCCTGGACTTGTCTATGACATTTCTTTGGAAGATTATGTACAAATGCTTTGCAACTTGGGTTACAACAACGAAAAGGTTAAATTAATCTCTGGAAAAGATAATGCTTGCTCCGAGCCTCCTAATAGATCCTTGGTGAGAGATCTCAATTATCCTGCTCTTGCTATTGATGTTGAGCCAACAACATCTTTTACCATAAATTTTAATAGAACAGTCACAAATGTTGGCCTAGCAAACTCAACTTATAAGGCAACAATTTTACCAAATCCAAGAATCAATGTAACGGTGGTACCCAAGATTCTATCCTTCAAATCTGTAGGTGAGAAACTATCTTTTACTGTTACTGTCATTGGTGATAAACTAACAACTGCGCTTACTTCATCATTAGTGTGGTCAGATGGCACCCACAATGTTAGAAGTCCAATTGTTATAGATGTTTCCAATTAG 2016 0.3894 MMQEVFNDDDATNSLIQSYQRSFNGFAAMLTNQQKEKLSQMEGVVSVFPSRKFQLQTTRSWDFLGLPKSVNRSPAKESDVVVGVLDTGIWPESDSFNDQDFGPVPKHWKGVCAGGTNFTCNKKIIGARYYTDKSARDLNGHGTHTASTAAGNYVPSASFYGLAQGTARGGVPLARIATYKTCNELGCDGAAILSAFDDAIADGVNIISVSLGGSSQLPFHQDPIAIGSFHAMKRGILTVNAAGNSGPRPTSSSSVAPWILTVAASTIDRKFIDKVVLENGKTLTGISINSFTFNGTQILIAKKNGGPKCLEENANACNCFDSNLVDGKIILCDKGHGILGEDYDSVNPAGIIIQSRRKGLPAFVEPLPSLSLSETDFQLLKSYVNSTNNPKAEILKSETVTDDNAPMIIGFSSRGPNTIAPEILKPDISAPGVDILASFSPAASPSGIKIDKRSVKYNIISGTSMACPHVSGIAAYLKTFHLDWSPAAIKSALMTSAQPMKGSEDEIGEYAYGSGHVNPIPATNPGLVYDISLEDYVQMLCNLGYNNEKVKLISGKDNACSEPPNRSLVRDLNYPALAIDVEPTTSFTINFNRTVTNVGLANSTYKATILPNPRINVTVVPKILSFKSVGEKLSFTVTVIGDKLTTALTSSLVWSDGTHNVRSPIVIDVSN 671
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2106 671 PRINTS Subtilisin serine protease family (S8) signature 77 96 IPR015500 -
Lal1g2106 671 PRINTS Subtilisin serine protease family (S8) signature 137 150 IPR015500 -
Lal1g2106 671 PRINTS Subtilisin serine protease family (S8) signature 461 477 IPR015500 -
Lal1g2106 671 Pfam Peptidase inhibitor I9 9 55 IPR010259 -
Lal1g2106 671 ProSiteProfiles Serine proteases, subtilase domain profile. 60 523 - -
Lal1g2106 671 Pfam Fibronectin type-III domain 571 667 IPR041469 -
Lal1g2106 671 Gene3D Peptidase S8/S53 domain 79 536 IPR036852 GO:0004252|GO:0006508
Lal1g2106 671 Pfam Subtilase family 78 515 IPR000209 GO:0006508|GO:0008236
Lal1g2106 671 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 56 IPR037045 -
Lal1g2106 671 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 6 669 - -
Lal1g2106 671 Gene3D - 540 670 - -
Lal1g2106 671 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 6 669 IPR045051 -
Lal1g2106 671 CDD PA_subtilisin_like 275 394 - -
Lal1g2106 671 Gene3D - 268 401 - -
Lal1g2106 671 SUPERFAMILY Subtilisin-like 55 527 IPR036852 GO:0004252|GO:0006508
Lal1g2106 671 CDD Peptidases_S8_3 53 497 IPR034197 -
Lal1g2106 671 ProSitePatterns Serine proteases, subtilase family, serine active site. 462 472 IPR023828 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal1g2106 Lal-Chr1 23196405 23198420 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2106 1 667 Subtilisin-like Serine Gene Family AT5G59100 51.754 0.0 723
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2106 - - lang:109341651 951.814