Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2105 ATGTTGGCATGCACATTGTTTTCAAACTGTGATGCAAGTCATGATAATCCAAAACTTTATATTGTCTATATGGGCTCACTTCCTAAGACACCATATTCTCTAACCTATAACCATTTAAGCATGATGCAAGAAGTCTTTAATGACGTTGATGCAACAAATTCCTTAATCCAAAGTTACCAAAGAAGTTTCAATGGGTTTGCTGCCATGCTCACTAATCAACAAAAGGAAAAGCTTTCTCAGATGGAAGGTGTAGTCTCAGTTTTCCCAAGTAGAAAATTCCAACTAAAAACAACTCAGTCATGGGACTTCCTTGGACTCCCCAAGTCAGTCAATCGAAGTCGTGCCATAGAGAGTCATGTTGTGGTTGGAGTTATTGACAGTGGTATATGGCCTGAATCTGATAGTTTCAATGATCAAGGTTTTGGACCTGTTCCCAAACATTGGAAGGGTGTGTGTGCGGGTGGTACGAACTTTACTTGCAATAAAAAGATCATTGGTGCTAGATATTATATAGATAAATCTGCGAGAGACTTGAACGGACATGGGACACATACTGCATCAACAGCTGCTGGAAACTATGTTGATAATGCAAGCTTTTATGGACTTGCACAAGGTACTGCAAGAGGTGGAGTCCCCTTGGCGAGAATAGCTGCATATAAAGCATGTGATGATTCAGGATGTCAAAGTGCTGCTATCTTGTCTGCTTTTGATGATGCCATAGCTGATGGCGTAAACATCATTTCAGTTTCACTAGGAGGTTATTCCCAAGACCCTTTCGATGAAGATCCTATCGCGATTGGTTCATTTCATGCTATGGCAAGAGGGATACTCACAGTGAATGCGGCAGGAAATGAAGGTCCAAATCCAATCTCTACTTCTAGTGTAGCACCGTGGATGCTTACTGTAGCTGCAAGTACGATAGACCGAAGATTCATTGACAAAGTAGTTCTAGAGAATGGAAAAACACTAACAGGTATATCAATAAATTCTTTCACATTAAATGGAACACAAGTTCTCATTGCTAAGAAAAATGGCGGTCCAAATTGTTCAGAAGACGATGCTAATGCATGCAACTGTTTAGATAGTAATTCGGTGAATGGAAAAATAATTTTATGTGATCGGGGTCATGGAATTTTAGAGGATGATGTGAACCCAGCTGGTGTAATCATACAATCTCGTCGGAAAGGTTCACCCGCGTTTGTCACTCCATTACCTTCCTTGTCATTATCTATAACTGACTTTCAACTTTTGAAATCCTACACAAATTCAAGAGACAATCCTAAAGCTGAAATACTAAAGAGTGAGACAGTTACAGACGATAATGCTCCAACGGTAATTGGTTTTTCTTCACGTGGGCCTAATACAATTGCTCCAGAAATTTTGAAACCTGATATAAGCGCCCCAGGAGTGGAAATCTTGGCTTCATTTTCACCAGTTGTTTCTCCGTCAGATTATAAATTTGATAAAAGATCTGCAAAATATAACATAATATCAGGAACATCCATGGCATGCCCCCATGTCTCCGGAATTGCTGCATATTTGAAAACATTTCATTTGGATTGGTCACCGGCGGCCATCAAATCAGCTCTTATGACTTCAGCAAAACCTATTAAGAGCTCTGAGGATGAAATTGGTGAATATGCTTATGGGTCCGGTCATGTCAATCCTATTCCGGCTACTAATCCTGGACTTGTCTATGACATTTCTTTGGAAGATTATATACAAATGCTTTGCAACTTGGGTTACAATAATGAAAAGGTTAAATTAATCTCTGGAAAAAAGAATGCTTGCTCCCAGCCTCCTAATAGATCCTTGGTGAGGGATCTCAATTATCCCGCTCTTGCTATTGATGTTAAGCCAACAACATCTTTTACCATAAATTTTAATAGAACAGTCAGAAATGTTGGCCTAGCAAACTCAACTTATAAGGCAACAATTTTACCAAATCCAAGAATCAATATTACAGTGGTACCCAAGATTCTATCCTTCAAATTTGTAGGTGAGAAACTATCTTTTACCGTTACTGTCATTGGTGATAAACCAACAACCACGCTTACTTCATCATTAGTGTGGTCAGATGGCACCCACAATGTTAGAAGTCCAATTGTTATAAATGTTTCCGATTAG 2127 0.3916 MLACTLFSNCDASHDNPKLYIVYMGSLPKTPYSLTYNHLSMMQEVFNDVDATNSLIQSYQRSFNGFAAMLTNQQKEKLSQMEGVVSVFPSRKFQLKTTQSWDFLGLPKSVNRSRAIESHVVVGVIDSGIWPESDSFNDQGFGPVPKHWKGVCAGGTNFTCNKKIIGARYYIDKSARDLNGHGTHTASTAAGNYVDNASFYGLAQGTARGGVPLARIAAYKACDDSGCQSAAILSAFDDAIADGVNIISVSLGGYSQDPFDEDPIAIGSFHAMARGILTVNAAGNEGPNPISTSSVAPWMLTVAASTIDRRFIDKVVLENGKTLTGISINSFTLNGTQVLIAKKNGGPNCSEDDANACNCLDSNSVNGKIILCDRGHGILEDDVNPAGVIIQSRRKGSPAFVTPLPSLSLSITDFQLLKSYTNSRDNPKAEILKSETVTDDNAPTVIGFSSRGPNTIAPEILKPDISAPGVEILASFSPVVSPSDYKFDKRSAKYNIISGTSMACPHVSGIAAYLKTFHLDWSPAAIKSALMTSAKPIKSSEDEIGEYAYGSGHVNPIPATNPGLVYDISLEDYIQMLCNLGYNNEKVKLISGKKNACSQPPNRSLVRDLNYPALAIDVKPTTSFTINFNRTVRNVGLANSTYKATILPNPRINITVVPKILSFKFVGEKLSFTVTVIGDKPTTTLTSSLVWSDGTHNVRSPIVINVSD 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2105 708 PRINTS Subtilisin serine protease family (S8) signature 117 136 IPR015500 -
Lal1g2105 708 PRINTS Subtilisin serine protease family (S8) signature 177 190 IPR015500 -
Lal1g2105 708 PRINTS Subtilisin serine protease family (S8) signature 498 514 IPR015500 -
Lal1g2105 708 ProSitePatterns Serine proteases, subtilase family, serine active site. 499 509 IPR023828 -
Lal1g2105 708 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 5 96 IPR037045 -
Lal1g2105 708 Gene3D Peptidase S8/S53 domain 120 573 IPR036852 GO:0004252|GO:0006508
Lal1g2105 708 Pfam Fibronectin type-III domain 608 704 IPR041469 -
Lal1g2105 708 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 19 706 - -
Lal1g2105 708 CDD Peptidases_S8_3 93 534 IPR034197 -
Lal1g2105 708 Pfam Peptidase inhibitor I9 20 95 IPR010259 -
Lal1g2105 708 Gene3D - 577 707 - -
Lal1g2105 708 ProSiteProfiles Serine proteases, subtilase domain profile. 100 560 - -
Lal1g2105 708 Pfam Subtilase family 118 552 IPR000209 GO:0006508|GO:0008236
Lal1g2105 708 Gene3D - 308 438 - -
Lal1g2105 708 SUPERFAMILY Subtilisin-like 101 561 IPR036852 GO:0004252|GO:0006508
Lal1g2105 708 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 706 IPR045051 -
Lal1g2105 708 CDD PA_subtilisin_like 315 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2105 Lal-Chr1 23181866 23183992 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2105 14 704 Subtilisin-like Serine Gene Family AT5G59100 52.535 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2105 - - lang:109341651 941.414