Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2104 ATGCATTTAACTCATATCTGCATTGTTTTACCATCAAATTCTTGTGAAATAGATGAACCTGAAATGGTTACTCAACAAGTTTTTCAAACTCCAAAGATTGAAGAAGTTAAGGACAAAGAACCCCACAGAGATTGTGGGGGACAAGTTGTTTCTTTAGTTAAATGTTGTTTAAGGAAGTTACATAACTCAGGGTGGTGGAGAACTTGTAAACATGGATTGGAGAAAGAAAAGAAGAATAGTAGTTGTGTTGTGTTTCATGACATGGATGGTGTGCAAATTTCTTTGAAGATAGGTAGGGACAATCCAAGGATTTTCAGCTATGCTGAGCTTTTCATAGGGTCAAATGGTTTCAGTGAGGATCAAGTTGTTGGGAGTGGAGGATTTGGAAAAGTCTACAAAGCTCTTTTGCCAAGTGATGGAACTGTGGTTGCTGTGAAATGTTGGTTAGCAGAGAAAGGGAAACAATTTGAGAAAAGTTTTGCTGCCGAGTTAACAGCCGTGGCGGATCTTCGCCATCGGAACCTAGTTAGGTTGAGAGGATGGTGTGTTCATGAAGATCAGCTGTACCTTGTTTATGACTACATGCCGAATCGCAGCCTCGACCGCATACTCTTCGGTAAGCACAAGAATTTGAAGGCTGGGGGGCCTCTTGATTTGGGACAAAGAATGAAAATTGTGAATGGTTTAGCAGCTGCATTGTATTATCTACATGAACAGTTAGAAACTCAAATCATCCACAGGGATGTGAAAACAAGCAATGCGATGCTTGATTCTCATTATAATGCTCGGCTAGGTGACTTTGGCATGGCAAGGTGGCTGGAACATGAGATTGAGTACAAGACAAGGAAAACATCAGCAACAGTCGACCGGTTTCGGTTGGGAGAGACATCGAGAATTGGCGGCACAATTGGCTATCTTCCCCCTGAAAGCTTAGAAAAACCAAGCAATGCTACCTCCAAATCTGATGTCTTCAGCTTTGGGATAGTAGTGCTAGAGGTGGTATCTGGAAGGAAAGCAATAGATCTTACATACCCTGATGATCAAATCATTTTGCTTGATTGGGTCAGAAAGCTTTCCGATGAAGGGATGCTTATGGATGCAGCCGATGCTCGGATACCGGATGGATCCTACAAGCTGAATGAGATGCAACTTCTCATTCATTTAGGCCTTCTCTGCACATTCCATGACCCACAATTGAGGCCAAGCATGAAATGGATTTTGGAAGTACTTTCTGACTTTTCTTGCAAATTGCCAACACTCCCTTCATTTCAATCCCATCCTTTATATATCTCTTTGTCTCCTTCCCGGACCGAGACTAGTCCTAGCTGCAAGAGTGGCACTAGCACTTCAACAGAGAATGCTAGCATGATCACCAATTACACTTCGTCCAACTATGTCACAGCTGCAGGTGAAACTGTATATGTAACTGCTGAACATAAAAACAGCGAAATCATCTCGTTTAAGAGCATGCAGCATCACCAGCGACCGCTTCATGTATTTGAAACTCCAAGGGAAATATCATACAAGGAGATTGTTTCAGCTACAGATAACTTCTCAGACTCAAGAAGGGTGGCAGAGCTAGACTTTGGAACTGCTTATCATGGCATCCTTAATGGAAATTTACATGTTTCGGTGAAACGCCTAGGGATGAAAACATGTCCTGCATTGCGTGATAGATTCTCTAATGAACTCAGGAATCTAGGAAGGCTTCACCATAGGAATTTAGTGCAACTTCGTGGATGGTGCACCGAGCAAGGAGAGATGCTTGTTGTTTATGATTACTCGGCTAGTAGAATTCTGAGTCAAATACTTCTCCATCATAAAAATGGTAGAACTAGGAATCCTGTTCTACAATGGCATCACAGATACAACATATTGAAATCACTTGCATCGGCGATTCTATATCTGCACGAGGAATGGGAGGAACAAGTCATTCACAGAAACATTACCTCATCAGCTGTCATTCTTGAACCAGATATGAACCCAAGACTCAGCAGTTTTGCTCTAGCTGAATTTTTGTCAAGAAATGAGCATGGTCATCATGTAGTCAACGACACTTGCAAATCGGTTCGCGGGATTTTTGGCTACATCTCACCAGAATATGTGGAATCCGGTGAAGCAACGACAGCGGCCGATGTTTATAGTTTTGGTGTGGTGGTGCTTGAAGTGGTCAGTGGACAGATGGCAGTTGATTTCAGGCAGCCAGAGGTGCTATTGGTGAAAAAGGTTCATGAATTCGAGATTAGAAAAAAACCATTGAAAGAGTTAGCAGACATAAGACTCAATGGAGAGTACAATAATAAAGAGCTCATGAGATTGGTAAGATTAGGAATTGCTTGCACACATTGCAACCCACAATTAAGACCAAGCATGAGACAAATAGTAAGCATACTTGATGGAAATGATAAATTTCAGGTCAAAAGAATCAAGGAAAGCAGAGAAGAATGGAGACAAAGAAATGCTAGTGCTCTGTCCTTGGTTAAGAGAATCCAAGGTCTAGGAATACAGTAA 2511 0.4182 MHLTHICIVLPSNSCEIDEPEMVTQQVFQTPKIEEVKDKEPHRDCGGQVVSLVKCCLRKLHNSGWWRTCKHGLEKEKKNSSCVVFHDMDGVQISLKIGRDNPRIFSYAELFIGSNGFSEDQVVGSGGFGKVYKALLPSDGTVVAVKCWLAEKGKQFEKSFAAELTAVADLRHRNLVRLRGWCVHEDQLYLVYDYMPNRSLDRILFGKHKNLKAGGPLDLGQRMKIVNGLAAALYYLHEQLETQIIHRDVKTSNAMLDSHYNARLGDFGMARWLEHEIEYKTRKTSATVDRFRLGETSRIGGTIGYLPPESLEKPSNATSKSDVFSFGIVVLEVVSGRKAIDLTYPDDQIILLDWVRKLSDEGMLMDAADARIPDGSYKLNEMQLLIHLGLLCTFHDPQLRPSMKWILEVLSDFSCKLPTLPSFQSHPLYISLSPSRTETSPSCKSGTSTSTENASMITNYTSSNYVTAAGETVYVTAEHKNSEIISFKSMQHHQRPLHVFETPREISYKEIVSATDNFSDSRRVAELDFGTAYHGILNGNLHVSVKRLGMKTCPALRDRFSNELRNLGRLHHRNLVQLRGWCTEQGEMLVVYDYSASRILSQILLHHKNGRTRNPVLQWHHRYNILKSLASAILYLHEEWEEQVIHRNITSSAVILEPDMNPRLSSFALAEFLSRNEHGHHVVNDTCKSVRGIFGYISPEYVESGEATTAADVYSFGVVVLEVVSGQMAVDFRQPEVLLVKKVHEFEIRKKPLKELADIRLNGEYNNKELMRLVRLGIACTHCNPQLRPSMRQIVSILDGNDKFQVKRIKESREEWRQRNASALSLVKRIQGLGIQ 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2104 836 CDD STKc_IRAK 529 800 - -
Lal1g2104 836 ProSiteProfiles Protein kinase domain profile. 518 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2104 836 Gene3D Phosphorylase Kinase; domain 1 477 594 - -
Lal1g2104 836 SMART serkin_6 117 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2104 836 Gene3D Transferase(Phosphotransferase) domain 1 195 416 - -
Lal1g2104 836 Gene3D Transferase(Phosphotransferase) domain 1 600 824 - -
Lal1g2104 836 Pfam Protein tyrosine and serine/threonine kinase 524 798 IPR001245 GO:0004672|GO:0006468
Lal1g2104 836 SUPERFAMILY Protein kinase-like (PK-like) 495 799 IPR011009 -
Lal1g2104 836 ProSiteProfiles Protein kinase domain profile. 117 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2104 836 PANTHER - 3 834 - -
Lal1g2104 836 Pfam Protein kinase domain 118 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2104 836 PANTHER RECEPTOR LIKE PROTEIN KINASE S.2 3 834 - -
Lal1g2104 836 Gene3D Phosphorylase Kinase; domain 1 90 194 - -
Lal1g2104 836 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Lal1g2104 836 SUPERFAMILY Protein kinase-like (PK-like) 101 438 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2104 Lal-Chr1 23151911 23154421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2104 508 801 Receptor kinase-like Gene Family AT3G53810 38.127 6.18e-54 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lal1g2104 PK_Tyr_Ser-Thr 2.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2104 - - lang:109352493 1395.56