LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal1g2098	ATGCTTACTAATCAGCAAGTGGAAAAGCTTTCTCAAATGGAAGGTGTAGTCTCAGTTTTCCCAAGTAGAAAACTCCAACTACAAACAAGTCGGTCATGGGACTTCCTTGGACTCACCGTGTCAGTCAATCGAAGTCCTGCCATAGAGAGTGATGTTGTGGTTGGAGTTCTTGACAGTGGTATATGGCCTGAATCTGATAGTTTCAATGATCAAGGTTTTGGACCTATTCCCAAACATTGGAAGGGTGTATGTGCAGGTGGTACGAACTTTACTTGCAATAAAAAGATCATTGGTGCCAGATATTATACAGAAAAATCTGCGAGAGACTTGAACGGGCATGGGACACATATTGCATCAATAGCTGCTGGAAACTATGTTGATAGTGCAAGCTTTTATGGACTTGCACAAGGTACTGCAAGAGGTGGAGTCCCCTTGGCGAGAATAGCTGCATATAAAATATGTGATAATTTTGGATGCGAAAGTGCTGCTATCTTGTCTGCTTTCGATGATGCCATAGCTGATGGCGTAAACATCATTTCAGTTTCACTAGGAGGTTCTTCCCAATTACCGTTCGATAAAGATGCTATCGCAATTGGTTCATTTCATGCTATGGCAAGAGGGATACTCACAGTGAATGCTGCAGGCAATGCAGGTCCAGATCCAATCTCTACTTTTAGTGTAGCACCGTGGATACTTACTATAGCTGCAAGTACAATAGACCGAAGATTCATTGACAAAGTAGTTCTAGAGAATGGAAAAACACTAACAGGTATATCAGTAAATTCTTTCACATTAAATGGAACACAAATTCTTATTGCTAAGAAAAATGGGCGTCTAGAATGTTCAGAAGAAAATGCTAATGCATGCAACTGTTTAGATAGTAATTTGGTGGATGGAAAAATAATTTTATGTGATAAAGGTCATGGAATTGTAGAAGCAGATTATTATCATGTGAACCCAGTTGGTATAATCATACAATCTCGTCGGAAAGGTTCACCCGCGTTTGTCACTCCATTACCTTCCTTGTCATTATCTGAAACTAACTTTCAACTTTTGAAATCCTACATGAATTCAACAGACAATCCTAAAGCTGAAATACTAAAGAGTGAGACGGTTACAGACGATAATGCTCCTATGGTAATTGGTTTTTCTTCTCGTGGGCCTAATATAGTTGTTCCAGAAATTTTGAAACCAGATATAAGCGCTCCAGGAGTGAATATCATGGCTTCATTTTCACCAGCTGCTTCTCCGTCAAGTATTAAAATTGATAAAAGAGCTGCAAAATATAACATAATATCAGGAACATCCATGGCATGCCCCCATGTCTCTGGAATTGCTGCATATTTGAAAACATTTCATTTGGATTGGTCACCGGCAGCCATCAAATCTGCTCTTATGACTTCAGCACAACCTATGAAGGGTTCTGAGGATGAAATTGGTGAATATGCTTATGGATCCGGTCATGTCAATCCTATTCCGGCTACTAATCCTGGACTTGTATATGACATTTCTTTGGAAGATTATATACAAATGCTTTGCAACTTGGGTTACAATAACGAAAAGGTTAAATTAATCTCTGGAAAAGATAATGCTTGCTCCCAGCCTCCTAATAGATCATTGGTGAGAGATCTCAATTATCCTGCTCTTGCTATTGATGTTAAGCCAACAATATCTTTTACCATAAATTTTAATAGAACAGTCACAAATGTTGGCCTAGCAAACTCAACTTATAAGGCAACAATTTTACCTAATCCAAGAATCAATGTTACGGTGGTACCCGAGATTCTATCCTTCAAATATGTAGGTGAAAAACTATCTTTTACCGTTACTGTCATTGGTGATAAACCAACAACCACACTTACTTCATCATTAGTGTGGTCAGATGGCACCCACAATGTTAGAAGTCCAATTGTTATAGATGTTTCCGATTAA	1932	0.3866	MLTNQQVEKLSQMEGVVSVFPSRKLQLQTSRSWDFLGLTVSVNRSPAIESDVVVGVLDSGIWPESDSFNDQGFGPIPKHWKGVCAGGTNFTCNKKIIGARYYTEKSARDLNGHGTHIASIAAGNYVDSASFYGLAQGTARGGVPLARIAAYKICDNFGCESAAILSAFDDAIADGVNIISVSLGGSSQLPFDKDAIAIGSFHAMARGILTVNAAGNAGPDPISTFSVAPWILTIAASTIDRRFIDKVVLENGKTLTGISVNSFTLNGTQILIAKKNGRLECSEENANACNCLDSNLVDGKIILCDKGHGIVEADYYHVNPVGIIIQSRRKGSPAFVTPLPSLSLSETNFQLLKSYMNSTDNPKAEILKSETVTDDNAPMVIGFSSRGPNIVVPEILKPDISAPGVNIMASFSPAASPSSIKIDKRAAKYNIISGTSMACPHVSGIAAYLKTFHLDWSPAAIKSALMTSAQPMKGSEDEIGEYAYGSGHVNPIPATNPGLVYDISLEDYIQMLCNLGYNNEKVKLISGKDNACSQPPNRSLVRDLNYPALAIDVKPTISFTINFNRTVTNVGLANSTYKATILPNPRINVTVVPEILSFKYVGEKLSFTVTVIGDKPTTTLTSSLVWSDGTHNVRSPIVIDVSD	643

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal1g2098	643	Pfam	Subtilase family	50	487	IPR000209	GO:0006508\|GO:0008236
	Lal1g2098	643	PANTHER	SUBTILISIN-LIKE PROTEASE SBT4.3	2	641	-	-
	Lal1g2098	643	ProSiteProfiles	Serine proteases, subtilase domain profile.	32	495	-	-
	Lal1g2098	643	Gene3D	-	512	641	-	-
	Lal1g2098	643	ProSitePatterns	Serine proteases, subtilase family, serine active site.	434	444	IPR023828	-
	Lal1g2098	643	ProSitePatterns	Serine proteases, subtilase family, histidine active site.	113	123	IPR022398	-
	Lal1g2098	643	Gene3D	Peptidase S8/S53 domain	51	508	IPR036852	GO:0004252\|GO:0006508
	Lal1g2098	643	Pfam	Fibronectin type-III domain	543	639	IPR041469	-
	Lal1g2098	643	PRINTS	Subtilisin serine protease family (S8) signature	49	68	IPR015500	-
	Lal1g2098	643	PRINTS	Subtilisin serine protease family (S8) signature	109	122	IPR015500	-
	Lal1g2098	643	PRINTS	Subtilisin serine protease family (S8) signature	433	449	IPR015500	-
	Lal1g2098	643	CDD	PA_subtilisin_like	247	366	-	-
	Lal1g2098	643	CDD	Peptidases_S8_3	25	469	IPR034197	-
	Lal1g2098	643	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	2	641	IPR045051	-
	Lal1g2098	643	SUPERFAMILY	Subtilisin-like	49	496	IPR036852	GO:0004252\|GO:0006508
	Lal1g2098	643	Gene3D	-	240	373	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal1g2098	Lal-Chr1	23138532	23140463	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal1g2098	2	639	Subtilisin-like Serine Gene Family	AT5G59100	53.435	0.0	698

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal1g2098	-		-	lang:109341651	889.026