Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2095 ATGTCTTCTCGTCCAATTCAACCTGCTATTCGTAATTTCCCAAATGGGTGTGGTCCTTTTTCTCAAAGAATCACTCATATTTCGAAAGGGTGTCCTCACAAAGATGATGATGAAGATTTTTCAACTAAAAATCTGAACTTTGTTTCATATGATGAAATGGGTTATCCTTCAAATGCAACAATTTCATCTGGGGTTGTAGTTAGAAGTTATTCTACACAACCAAGGGTTTCAGCCATTAGAGATTTTCCTCCATTATGTGGATTTAATGTCCATAAGAAAGAGGAAAATCATGATAATGAACCAGGGAGTGTGGTTAAAGAAAATGTGAAAAATCATGGTGAAGAAAATTTTAGGTATAAGAGTTTAAGGAAAAAGGTGGTTTTTTCATCTAGTAGAATAGTGTCACATGGTGATGAAGTTCCTTCTAAATTTGATTATGTGTATAAATCTTCAAATGTTCCTGTTTTGGGTCATGGTAGGTTTGATGTTGGTGGAAGTTCAAATCAAAACAAGGGAAAGAGTAGTAAAGAAGTTCCACATTATGTTGGGAACAAGTTTTCAAAGAAGGAAGGGAAGGGTTGTGTTCAAAGAAAGATGCAGGAGTTTCCCAATGTTAATGTTGTTGCTCCTTTCGATCGGAATGGACGGAACGTGAAAGCTCGAATTAGAGTGAGGGCGACTTTGCGCCTTTTCCATGCTGTTTGTAGAAGGTTAATGAAGGAAGAAAATAAGATGTCGAGAGGAGGCGGTAGGGCTGATGTTCGAGCTGCTAAGTTTCTTTATGATAATGGAAAATATATCAATGAAGGGAAGCAGATCATAGGACCTGTCCCCGGTGTTGAAGTTGGTGATGAATTTCAGTACTGGAAGGAGCTTAACATAGTTGGCCTTCATAATCAGCTTTTAGCTGGCATCGGTTTTTCGAAACACAATGGTAGGGTCCTTGCTACTAGTGTTGTTTCATCATCGGGGCATTATGATGATGAAATGGATAGTACCGATGTTTTGGTTTATACAGGGCAAGGGGGGAATGTGATAAAAAATAAAAACACTGATAAACCGGAAGACCAGAAACTCGAGAGGGGGAATCTTGCTTTGAAGAATAGCATCGAGGCAAAGAATCCAGTTAGGGTGATTATGAAGTCTGAATCAAAGGATGGAAGCTGTAAAATATATGCATACTATGGGCTGTATGAAGTTGTGAGATACTGGCAGGAGAGATGGTCACACGGAATGTTGGTTTTCAAATTTGAGATGAGAAGGATACCGGGTCAATTAGATGTTCCATGGAAAGAGTTGAAGAAATCCGAAAAATCGAAAATGAGGAAGGGTTTATTTGTGGGTGACATTTCTTATGGGAAAGAGCTAATTCCCGTGTGCGCTATTAACACCGTTGATGATGAGAAACCCCCGAAATTTGAATACTTATCTAGCATGACATATCCTAATTGGTATAGGCCTATTCCTCCGGTTGGTTGTGACTGTACTAGTGGATGCACTGACTCAGAGAAGTGTGCTTGTGCAGTGAAAAATGGGGGTAAAATCCCATTCAATCATAATAAGGCTATCGTGGAAGCAAAGCCGAAAAGTATCGTCTATGAATGTGGTCCTCATTGCAGGTGCCCTCCAACATGCCATAATAGAGTCAGTCAACATGGCGTAAAATTTCAATTTGAAATTTTTAAGACAAAGACAAAGGGATGGGGAGTGAGATCCCTTAATACCATTCCTTCGGGAAGTTTTATCTGTGAATACACTGGAAAACTTCTCGAAGACGCAGAAGCTGAAAAAAATATCGGTAAAGATGAGTATCTGTTTGATATTGGGAATAACTACGTCGATAGCAGTCTTTGTGAAGAACTTTTGAAAATCATGCCTGATGCAGGAGACTCAAGTTCTTCCCAAGTTTTCGAGGACGGTGGCTTCACCATTAATGCTGCCAACTATGGTAATGTAGGGAGATTTATCAACCATAGTTGCTCTCCTAACCTTTTTACTCAAAATGTCCTTTACGATCATGACGATAAGAAGATTCCTCACATAATGCTATTTGCCGATATGAACATTCCTCGCATGCAAGAGCTGGCTTACCATTACAATTACAAAATAGATCAAGTTTTCGATTCCGACGGCAATATAAAGAAGAAGAATTGCTTTTGTGGTGCTCTGGAGTGTACTGGCAGGATGTATGACATTCATCAAAGTGTCAAACTGGAATTTCGTTCGAGAATCGAGCTTTGCATTTTGCAATTCCGTCTCATTCTAATCGACAAGTAG 2277 0.3935 MSSRPIQPAIRNFPNGCGPFSQRITHISKGCPHKDDDEDFSTKNLNFVSYDEMGYPSNATISSGVVVRSYSTQPRVSAIRDFPPLCGFNVHKKEENHDNEPGSVVKENVKNHGEENFRYKSLRKKVVFSSSRIVSHGDEVPSKFDYVYKSSNVPVLGHGRFDVGGSSNQNKGKSSKEVPHYVGNKFSKKEGKGCVQRKMQEFPNVNVVAPFDRNGRNVKARIRVRATLRLFHAVCRRLMKEENKMSRGGGRADVRAAKFLYDNGKYINEGKQIIGPVPGVEVGDEFQYWKELNIVGLHNQLLAGIGFSKHNGRVLATSVVSSSGHYDDEMDSTDVLVYTGQGGNVIKNKNTDKPEDQKLERGNLALKNSIEAKNPVRVIMKSESKDGSCKIYAYYGLYEVVRYWQERWSHGMLVFKFEMRRIPGQLDVPWKELKKSEKSKMRKGLFVGDISYGKELIPVCAINTVDDEKPPKFEYLSSMTYPNWYRPIPPVGCDCTSGCTDSEKCACAVKNGGKIPFNHNKAIVEAKPKSIVYECGPHCRCPPTCHNRVSQHGVKFQFEIFKTKTKGWGVRSLNTIPSGSFICEYTGKLLEDAEAEKNIGKDEYLFDIGNNYVDSSLCEELLKIMPDAGDSSSSQVFEDGGFTINAANYGNVGRFINHSCSPNLFTQNVLYDHDDKKIPHIMLFADMNIPRMQELAYHYNYKIDQVFDSDGNIKKKNCFCGALECTGRMYDIHQSVKLEFRSRIELCILQFRLILIDK 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2095 758 SUPERFAMILY PUA domain-like 259 434 IPR015947 -
Lal1g2095 758 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6-LIKE ISOFORM X1 182 729 - -
Lal1g2095 758 SMART set_7 556 706 IPR001214 GO:0005515
Lal1g2095 758 Gene3D SET domain 442 730 IPR046341 -
Lal1g2095 758 ProSiteProfiles SET domain profile. 556 700 IPR001214 GO:0005515
Lal1g2095 758 ProSiteProfiles YDG domain profile. 275 421 IPR003105 -
Lal1g2095 758 Pfam SAD/SRA domain 274 425 IPR003105 -
Lal1g2095 758 Pfam Pre-SET motif 450 548 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lal1g2095 758 SUPERFAMILY SET domain 439 707 IPR046341 -
Lal1g2095 758 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 182 729 - -
Lal1g2095 758 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 101 743 IPR025794 GO:0016571
Lal1g2095 758 Pfam SET domain 567 700 IPR001214 GO:0005515
Lal1g2095 758 ProSiteProfiles Post-SET domain profile. 714 730 IPR003616 -
Lal1g2095 758 SMART G9a_1 270 425 IPR003105 -
Lal1g2095 758 ProSiteProfiles Pre-SET domain profile. 491 553 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lal1g2095 758 Gene3D - 261 441 IPR036987 -
Lal1g2095 758 SMART preset_2 447 540 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2095 Lal-Chr1 23113429 23116055 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2095 271 730 EF-hand Containing Proteins AT5G13960 39.630 1.34e-102 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal1g2095 SAD_SRA 2e-46 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2095 K11420 - lang:109363359 1051.58