Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2081 ATGGCCGGCATAGACTTAGGTTCAGCATCGCACTTTGTTCACCATCTTCAACACCCAGACCTTGAAGAAGATGATAATCAAGATCAAGAAAACAACGAAAGCCTTGACCTAGTTTCACCAAATCAAGGTCGAGGAGGAGATGGTGTTGGTCGTAGACCTAGAGGTAGACCTCCCGGTTCTAAGAACAAGCCAAAACCACCGGTGATCATCACAAGAGAGAGTGCAAATACCCTTAGGGCACACATCCTTGAAGTTAGCAATGGTTGTGATGTATTTGACTCAGTTGCTACTTATGCAAGGAAGAGACAAAGAGGAATATGTGTCCTCAGTGGTAGTGGCACTGTCACCAACGTCACGTTGCGGCAGCCAGCTGCCGCAGGCACGGTGGTGACACTGCACGGAAGATTCGAGATACTTTCTTTGGCAGGGTCTTTCCTCCCACCTCCAGCACCACCAGGGGCAACAAGTTTGACTGTGTTCCTTGGTGGTGGCCAAGGCCAAGTTGTGGGAGGAAATGTTGTTGGTCCTTTGATAGCTTCTGGTCCTGTTATTGTTATTGCTTCATCATTCACTAACGTTGCATACGAAAGATTGCCCTTGGAAGATGATGAATCTCTTCAGATGCAACAAGGACAATCATCTGGCGGTGGCGGTGGCGGTGGTGGCGTCGGAGTTAATAACTCTTTTCCTGATCCATCTTCAGGGCTTCCATTTTTCAATCTACCCTTAAACATGCCTCAGTTACATGTTGATGGTTGGGCTGGAAATTCTGGTAGCCACACAATACAATACAACCATCAATCATTCCAAGAATACATAGATACAACAACCACTCTCACAATGAAAGCATGA 852 0.4671 MAGIDLGSASHFVHHLQHPDLEEDDNQDQENNESLDLVSPNQGRGGDGVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSNGCDVFDSVATYARKRQRGICVLSGSGTVTNVTLRQPAAAGTVVTLHGRFEILSLAGSFLPPPAPPGATSLTVFLGGGQGQVVGGNVVGPLIASGPVIVIASSFTNVAYERLPLEDDESLQMQQGQSSGGGGGGGGVGVNNSFPDPSSGLPFFNLPLNMPQLHVDGWAGNSGSHTIQYNHQSFQEYIDTTTTLTMKA 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2081 283 MobiDBLite consensus disorder prediction 204 227 - -
Lal1g2081 283 MobiDBLite consensus disorder prediction 20 69 - -
Lal1g2081 283 Pfam Plants and Prokaryotes Conserved (PCC) domain 79 192 IPR005175 -
Lal1g2081 283 Gene3D - 78 212 - -
Lal1g2081 283 ProSiteProfiles PPC domain profile profile. 75 213 IPR005175 -
Lal1g2081 283 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 16 260 IPR014476 GO:0003680
Lal1g2081 283 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 260 - -
Lal1g2081 283 SUPERFAMILY AF0104/ALDC/Ptd012-like 75 205 - -
Lal1g2081 283 CDD DUF296 79 154 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2081 Lal-Chr1 23019630 23022563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2081 1 256 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 56.849 2.35e-91 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2081 - - gmx:100814613 380.178