Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2078 ATGAATGCTACTATAATCATGTCTGAGGCAAAAACAGTGTTTGGTATAAAACCAGCTCCAATTATGGCTTCATTTTCTTCTAGAGGACCCAATTTGGTTGTGCCCTCAATACTTAAGGTCAAAAAATTTCATTCTTTAGCAACTCTTGTTCTTTTTTTACTATTTCAGCCACATATAACTGCACCAGGAGTGAACATACTTGCCGCTTTTTCAGAAGCGGCGAGTGCATCTAACCTACCATCAGACACACGTCGCGGTTTCCCTTTCAATGTACTACAAGGAACTTCTATGTCATGCCCTCATATCGCTGGCGTTGCTGGACTTCTCAAAACTCTTCATCCTAATTGGAGCCCTGCTGCAATTAAATCAGCAATTATGACTACTGCTTCGGCACGAGATAACACGAAGAGGCCGATTCCAGATGCATTTGATAAAACATTAGCTACCCCTTTTGCTTATGGTTCAGGACATGTTGAACCTGACCTTGCAATGGACCCAGGACTAGTTTATGATATAAGTGTTTCTGATTACTTGAATTTCTTATGTGCTTATGGATATGACCAAACACTCATTCTTGCACTCAATTCCAACAAATCTTTCACTTGTTCAAAATCTGTCAGCACAACAGACTTGAACTACCCTTCAATCACATTGCCAAATATCGACTTAAGCGTGGTAAATGTTACCCGGACAGTCACCAATGTCGGGCCTCCAAGCACATACAATGCTAATGTCAACTTGCCTGGATTCAAGATTGTTGTTGTTCCAAATTCCTTGACTTTTAAGAAACCTGGTGAGAAGAAGACATTCATAGTTATTGTGCAGGCGACAAGGGCGACTCGACCCGTAAATTATACATTCGGGGAGCTACGATGGACAAATAATGTAACACATATTGTTAGAAGTCCTATTGTAGCTAGGCTCAATTGA 930 0.4075 MNATIIMSEAKTVFGIKPAPIMASFSSRGPNLVVPSILKVKKFHSLATLVLFLLFQPHITAPGVNILAAFSEAASASNLPSDTRRGFPFNVLQGTSMSCPHIAGVAGLLKTLHPNWSPAAIKSAIMTTASARDNTKRPIPDAFDKTLATPFAYGSGHVEPDLAMDPGLVYDISVSDYLNFLCAYGYDQTLILALNSNKSFTCSKSVSTTDLNYPSITLPNIDLSVVNVTRTVTNVGPPSTYNANVNLPGFKIVVVPNSLTFKKPGEKKTFIVIVQATRATRPVNYTFGELRWTNNVTHIVRSPIVARLN 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2078 309 Gene3D - 5 14 - -
Lal1g2078 309 Gene3D Peptidase S8/S53 domain 15 177 IPR036852 GO:0004252|GO:0006508
Lal1g2078 309 SUPERFAMILY Subtilisin-like 23 211 IPR036852 GO:0004252|GO:0006508
Lal1g2078 309 PANTHER SUBTILISIN-LIKE PROTEASE GLYMA18G48580 3 305 - -
Lal1g2078 309 Pfam Subtilase family 12 135 IPR000209 GO:0006508|GO:0008236
Lal1g2078 309 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 305 IPR045051 -
Lal1g2078 309 Gene3D - 181 308 - -
Lal1g2078 309 ProSitePatterns Serine proteases, subtilase family, serine active site. 94 104 IPR023828 -
Lal1g2078 309 Pfam Fibronectin type-III domain 210 305 IPR041469 -
Lal1g2078 309 ProSiteProfiles Serine proteases, subtilase domain profile. 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2078 Lal-Chr1 22991744 22995499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2078 17 309 Subtilisin-like Serine Gene Family AT5G59810 53.220 9.10e-95 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2078 - - gmx:100803751 412.149