Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2017 ATGGAAAGTACTAGGCAGTGGTTTAGTAAGTTCATTCCTAAGGACAAAACGAAGTCTACAAATGACAAGGAAACTAATGGCATAACAAAGCAAGGATCCAAACCCTCAACGAATGACGAAGCACCTTCAAATATAACGAAACAGAAGGTTGAAGCTGCAAAGCAGTACATAGAAAACCATTATAAGAAGCAGATGCAGAGCCTGCAGGAGCGGAAGGAAAGACGTAATATCCTAGAAAAAAAGTTGGCCGATGCTGAAGTCTCCGAGGAAGAGCAGAACAACTTGCTTCATTATTTGGAGAGAAAGGAGACAGAATACATGCGCCTTATGAGACATAAGATGGGGGCCGATGACTTTGAGCCCCTCACTATGATTGGGAAGGGTGCATTTGGAGAGGTTAGAGTCTGCCGGGAGAAGGCAAGTGGTCATGTATATGCTATGAAGAAGCTTAAGAAATCAGAGATGCTTCGCAGAGGCCAGGTTGAACATGTAAAAGCTGAGAGGAACCTACTTGCTGAAGTTGACAGCAATTGCATTGTAAAACTTTATTGTTCCTTTCAAGATGAAGGGTATTTATATCTCATAATGGAGTATCTACCCGGTGGAGATATGATGACGTTGCTGATGCGGAAAGATATACTAACAGAAGATGAGGCCAGGTTCTATGTTGGAGAGACTATCCTAGCCATCGAGTCGATTCATAAACATAATTATATTCATAGAGATATCAAGCCTGACAACTTGCTGTTAGATAGACATGGTCACATGAAATTATCAGATTTTGGGTTATGCAAACCGCTAGACTGCAGTAATCTTCAGGAAAAGGACTTCTCGATTCGAAGTAACAGAAGTGGAGCTCTTCAGAGTGATGGACGTCCAGTGGCTCCTACACGAACACAACAGGAACAACTGCAACATTGGCAAAAAAATAGGCGAATGCTTGCGTATTCTACAGTTGGAACGCCTGATTATATTGCTCCTGAAGTTCTACTGAAGAAAGGATATGGCCTGGAATGTGATTGGTGGTCTCTTGGAGCTATAATGTATGAAATGCTTGTAGGTTATCCACCCTTTTATTCAGATGAACCGATGTTGACTTGTAGAAAGATAGTAAATTGGAAAACTTATCTAAAATTTCCGGAAGAAGCTAAACTATCATCAGAGGCTAAGGATCTTATTTGTAGACTCCTATGTAATGTAGACCAGAGGCTTGGAACCAAAGGAGCCTATGAAATAAAGGCTCACCCATGGTTCAAAGGTATTGAATGGGATAAATTGTACCATATGAGCGCCGCTTTTATACCCGAGGTCAACGATGAATTAGATACCCAAAATTTTGAGAAGTTTGAAGAGGTGGACAAGAAAACTGAATCCTCCTCAAATGCTGCAGGCCCATGGAAGAAGATGCTGCCATCTAAGGATGTTAACTTTGTTGGCTATACATATAAGAATTTCGAAATTTTGAATGATCATGAAATACCTGGAATTGCTGAATTGAAGAAGAAGAGCTCAAAACCTAAAAGGCCATCTATTAAGTCCCTATTTGATGATGAATCAGCTATGGCTTCCAATCAACCAATTAAAGGGAGCTTCTTAAACCTCTTACCTCAGATGGAAGAAGTTCCTGAGAATAACAATGATCAAAAATAG 1650 0.4048 MESTRQWFSKFIPKDKTKSTNDKETNGITKQGSKPSTNDEAPSNITKQKVEAAKQYIENHYKKQMQSLQERKERRNILEKKLADAEVSEEEQNNLLHYLERKETEYMRLMRHKMGADDFEPLTMIGKGAFGEVRVCREKASGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEGYLYLIMEYLPGGDMMTLLMRKDILTEDEARFYVGETILAIESIHKHNYIHRDIKPDNLLLDRHGHMKLSDFGLCKPLDCSNLQEKDFSIRSNRSGALQSDGRPVAPTRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGLECDWWSLGAIMYEMLVGYPPFYSDEPMLTCRKIVNWKTYLKFPEEAKLSSEAKDLICRLLCNVDQRLGTKGAYEIKAHPWFKGIEWDKLYHMSAAFIPEVNDELDTQNFEKFEEVDKKTESSSNAAGPWKKMLPSKDVNFVGYTYKNFEILNDHEIPGIAELKKKSSKPKRPSIKSLFDDESAMASNQPIKGSFLNLLPQMEEVPENNNDQK 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2017 549 MobiDBLite consensus disorder prediction 500 549 - -
Lal1g2017 549 MobiDBLite consensus disorder prediction 1 47 - -
Lal1g2017 549 Gene3D Transferase(Phosphotransferase) domain 1 205 435 - -
Lal1g2017 549 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 492 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lal1g2017 549 MobiDBLite consensus disorder prediction 24 47 - -
Lal1g2017 549 Coils Coil 68 88 - -
Lal1g2017 549 Pfam Protein kinase C terminal domain 437 482 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lal1g2017 549 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Lal1g2017 549 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 522 - -
Lal1g2017 549 MobiDBLite consensus disorder prediction 500 514 - -
Lal1g2017 549 CDD STKc_NDR_like 117 483 - -
Lal1g2017 549 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2017 549 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2017 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Lal1g2017 549 MobiDBLite consensus disorder prediction 517 531 - -
Lal1g2017 549 SUPERFAMILY Protein kinase-like (PK-like) 93 454 IPR011009 -
Lal1g2017 549 MobiDBLite consensus disorder prediction 9 23 - -
Lal1g2017 549 Gene3D Phosphorylase Kinase; domain 1 109 204 - -
Lal1g2017 549 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 41 522 - -
Lal1g2017 549 SMART serkin_6 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g2017 549 SMART pkinase_C_6 419 484 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2017 Lal-Chr1 22278427 22287778 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2017 1 543 AGC Kinase Gene Family AT3G23310 79.487 0.0 888
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lal1g2017 Pkinase 4.6e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2017 K08790 - gmx:100795087 992.645