Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1989 ATGGAAATTTGGTTCACTATCCTCGTTTCTCTGAGTCTTGTTTTTCTGATCAAAGCCTTATTTTCTTTTCTTGAATCATTCACCAAAATCACAAACCCCATTCCTCCTGGTCCTCCCCACATACCTATCATAACCCCTATCAAATGGCTCACTAAATCACTTTCAGAGATAGAACCAATTCTCAAATCGCTCCACGCCAAGTATGGTCCTATGGTCACTCTCCGCATTGGTTCTCGCCCAACCATCTTCATCGCCGACCGCACTCTCGCCCACCAAGCATTAATCCAAAATGGCACACTCTTTGCACATCGTCCAAGATCCCTCCCTGTCAACAAAATCACATCTAGCAACCAACACAACATCTCCTCCGCCTCCTACGGTCCTACATGGCGCGCCCTCCGCCGCAATCTCGCCGTCGAGATGCTCCACCCTTCTCGAGTCAAATCCTTCACCCAAACACGCAAGTGGGTCCTCGAAGTCCTTCTCAACCGTCTCAATTTCGATTCAAAATCCAATGACTCCATTAGAGTCAAGGATCATATTCAATTTGCCATGTTCTCATTACTCGTCTTCATGTGTTTCGGTGAACGAGTTGATGATGAGAAACTCAGTGACATCGAGCGAGTACAACGTGGTTTTCTTCTTAGGTTCAATAGTTTCAATGTACTAAATTTTTGGCCTACAATTACGAAGTTTTTGTTCCGAAAACGTTGGGAGGAGTTCTTGAAATGTCGGAGTGATCAAGAAGAAGTGCTAGTTCCTCTTATTAAAGAGAGGAAGAAAGCAAAGGAAACCGGATTGTTAAATGACAGTAATAACCCTCCTGCATATGTGGATACTTTGTTGGACTTGAAGTTACCAAAAGAAGGACAACGTAATTTGGATGAAGGCGAAATTATGACATTGTGTTCGGAGTTTCTCACTGCAGGCACAGATACAACATCCACTGCATTGCAATGGATCATGGCAAATTTGGTGAAGTACCAACACGTTCAACAAAGGCTCGTGGAGGAAATTGGAAAAATTGTGGCACTGAAAGACATTGATAAAAATGAAAAGGAAGTGATCAATGAAGAAGACTTAGAGAAATTGCCTTATCTGAAGGCAGTAATTTTAGAAGCTCTAAGGCGCCACCCACCAGGGCACTTTGTATTGCCTCATGCTGTGAGTGAGGATGTGGTTTTGAATGGTTACTTGGTGCCCAAGGAAGGGACAATAAATTTCATGGTGGCTGAAATTGGGTGGGACCCACAAGTGTGGGAAGATCCAATGGCTTTTAAGCCAGAGAGGTTTATGAATGAGGATTGTAGTAAAGTTGAAGTGTTTGATATAACAGGAACTAAGGAGATAAAGATGATGCCATTTGGAGCAGGGAGAAGGATTTGTCCTGGCTATAATTTAGCATTGCTTCATTTGGAGTATTTTGTTGCTAATTTGGTTTGGAATTTTCATTGGAAGGTTCCTAAAGGAGGTGATGTTGATTTCTCAGAAAAACAAGAATTCACCATTGTCATGAAAAATCCACTTATGGCTCACATTTCTCCTAGAATTCACCATTAA 1560 0.4231 MEIWFTILVSLSLVFLIKALFSFLESFTKITNPIPPGPPHIPIITPIKWLTKSLSEIEPILKSLHAKYGPMVTLRIGSRPTIFIADRTLAHQALIQNGTLFAHRPRSLPVNKITSSNQHNISSASYGPTWRALRRNLAVEMLHPSRVKSFTQTRKWVLEVLLNRLNFDSKSNDSIRVKDHIQFAMFSLLVFMCFGERVDDEKLSDIERVQRGFLLRFNSFNVLNFWPTITKFLFRKRWEEFLKCRSDQEEVLVPLIKERKKAKETGLLNDSNNPPAYVDTLLDLKLPKEGQRNLDEGEIMTLCSEFLTAGTDTTSTALQWIMANLVKYQHVQQRLVEEIGKIVALKDIDKNEKEVINEEDLEKLPYLKAVILEALRRHPPGHFVLPHAVSEDVVLNGYLVPKEGTINFMVAEIGWDPQVWEDPMAFKPERFMNEDCSKVEVFDITGTKEIKMMPFGAGRRICPGYNLALLHLEYFVANLVWNFHWKVPKGGDVDFSEKQEFTIVMKNPLMAHISPRIHH 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1989 519 PANTHER CYTOCHROME P450 4 515 - -
Lal1g1989 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Lal1g1989 519 Gene3D Cytochrome P450 28 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal1g1989 519 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 515 - -
Lal1g1989 519 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal1g1989 519 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal1g1989 519 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal1g1989 519 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal1g1989 519 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal1g1989 519 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal1g1989 519 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal1g1989 519 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal1g1989 519 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal1g1989 519 Pfam Cytochrome P450 35 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal1g1989 519 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal1g1989 519 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal1g1989 519 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal1g1989 519 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal1g1989 519 SUPERFAMILY Cytochrome P450 35 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1989 Lal-Chr1 22013280 22017625 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1989 1 519 Cytochrome P450 AT1G64940 55.408 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1989 K24184 - gmx:100795683 706.442