Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1987 ATGGCTTCATCACTTCCATCTTTGGTGTTTGAAGTTAATAGGAAAAGGCCAGAACTAGTATCTCCATCAAAACCAACCCCTCATGAAGTGAAACTACTCTCAGACATAGATGACCAAGATGGCTTACGTTTTCAAATCCCAGTGATACAATTCTATCGTTATGACCCATCATTGGAAGGGAAAGACCCTGTTGATGTTATTAGAAAGGCACTAGCCAAAACATTAGTGTTTTATTACCCTTTTGCAGGTAGGCTTAGGGAAGGTCCTAGTAGAAAACTCATGGTGGATTGTAGTGGAGAGGGTGTGTTATTCATTGAGGCTGATGCAGATGTAACACTTAACCAATTTGGTGATGCTCTTCAACCTCCATTTCCTTGTTGGGAGGAGCTACTTTATGATGTTCCTGGCTCTCAAGGAGTCCTTAACACTCCCTTGTTGCTTATACAGGTAACACGTCTTAAGTGTGGTGGCTTCATCTTAGCCCTCCGGCTAAACCACACGATGAGCGATGCAGCTAGCTTGGTCCAATTCATGACAGCGGTGGGTGAAATGGCTCAGGGAGCTTCCGAGCCATCAATTCTACCAGTGTGGCGTAGAGAGCTTCTGAATGCAAGGGACCCACCAAGAGTAACATGCACTCATCGAGAATATGAACAAGTTCCTGATACTAAAGGAACCATTATCCCTTTGGATGATATGGTTCATCGCTCCTTCTTCTTTGGTCCAAATGAGGTAGCTGCAATTCGACGTCTGATTCCACCCCACCAGCTAAAGTGCTCCAACTTTGAAATCCTCACCGCATGTCTATGGCGTTGCAGAACAATCGCATTGCAACCCGAAAATGATGAAGAAGTTCGCATTATTTGTATAGTAAATGCTCGTGCTAAGTTTAACCCTCCGTTACCACGCGGTTACTACGGCAACGCTTTCGCATTTCCGGTGGCTGTCACAACCGCAGGAAAACTTAGTGAGAATCCACTAGGCTATGCATTGGAGTTAGTGAGAAAAGCAAAATCCGATGTGACTGAAGAGTACATGCATTCCGTGGCGGATTTAATGGTCATTAAAGACCGACCACATTTTGCTGTGGTCAGGTCTTATCTCGTGTCGGACGTGACACGTGCCGGTTTTAGCGAGGTGGATTTTGGCTGGGGAAAAGCTTTATATGGTGGACCCGCTAAGGGAGGTGTTGGAGCAATACCTGGTGTTGCTAGTTTTTATATACCCTTTGAGAATTCTAAAGGTGAGGGTGGTTTGGTAATTCCAGTTTGTTTGCCTTCCGAAGCAATGGAGAGGTTTGTTAAAGAGTTGGACAATGTTCTTAAGAAGAAGCATGTCCAACAACCTAAGTCAAGTTTAATTGTCTCTTCGTTGTAG 1377 0.4459 MASSLPSLVFEVNRKRPELVSPSKPTPHEVKLLSDIDDQDGLRFQIPVIQFYRYDPSLEGKDPVDVIRKALAKTLVFYYPFAGRLREGPSRKLMVDCSGEGVLFIEADADVTLNQFGDALQPPFPCWEELLYDVPGSQGVLNTPLLLIQVTRLKCGGFILALRLNHTMSDAASLVQFMTAVGEMAQGASEPSILPVWRRELLNARDPPRVTCTHREYEQVPDTKGTIIPLDDMVHRSFFFGPNEVAAIRRLIPPHQLKCSNFEILTACLWRCRTIALQPENDEEVRIICIVNARAKFNPPLPRGYYGNAFAFPVAVTTAGKLSENPLGYALELVRKAKSDVTEEYMHSVADLMVIKDRPHFAVVRSYLVSDVTRAGFSEVDFGWGKALYGGPAKGGVGAIPGVASFYIPFENSKGEGGLVIPVCLPSEAMERFVKELDNVLKKKHVQQPKSSLIVSSL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1987 458 Gene3D - 8 217 IPR023213 -
Lal1g1987 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 445 - -
Lal1g1987 458 Gene3D - 218 437 IPR023213 -
Lal1g1987 458 PANTHER - 9 445 - -
Lal1g1987 458 Pfam Transferase family 11 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1987 Lal-Chr1 21953310 21958453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1987 11 437 Monolignol Biosynthesis Gene Families AT5G48930 30.493 1.03e-52 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1987 K19861 - gmx:100797017 782.326