Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1973 ATGTGTGGAATATTTGCGTATCTGAATTACAACGTGAACAGAGAAAGAAGTTACATATTACAAGTTCTCTTTAATGGGTTAAGGCGTTTGGAATATCGTGGTTATGATTCCGCTGGAATCGCCATCGATTCTTCTTCATTTCTCTCTGTTACTTCCGATCCAATTTCCTCTTCCAATTCCATTTCCATTTCTGCATCAATTCCTCCTCCTCTCGTATTTCGCCGAGAGGGAAATATTGAATCACTCGTTAAATCCGTTTATCAAGAAGTGTCAGAAGTGGAACTGAACTTGGAGGAATCATTTTCGACGCATGCCGGAATAGCGCATACTCGATGGGCTACTCATGGAGAGCCTGCACCGAGGAACAGTCATCCTCAGTCATCTGGTCCTGGAGATGATTTCCTTGTTGTTCACAATGGTGTTATCACTAATTATGAGGTTTTGAAGGAAACACTTGTCCGACACGGCTTCATCTTTGAATCTGAAACCGACACGGAAGTCATTCCGAAGCTTGCGAAGTTTGTTTATGACAAAGCAGCTGAAGCAGCAGGTGATCAGATTGTTACCTTCAGTGAAGTTGTCCTGGAAGTTATGAGGCATCTTGAAGGAGCTTATGCCCTTATCTTCAAAAGTCGACATTATCCTAATGAATTGATTGCTTGCAAGCGTGGTAGCCCACTGCTCTTAGGTGTTAAAGAATTGAGAGAAAATCAGGAAAATGGTTCTGCATTTGAGGATAACAAATTCCTGTCAAAAGACGGACATCCTAAAGAATTGTTTTTGTCCAGTGATGCCCATGCTGTGGTTGAGCATACAAAGAAAGTGCTAGTTGTTGAGGATGGTGAAGTAGTTCATCTCAAGGATGGTGGGGTTTCTATTTTGAAGTTTGAAAATGACAAGGGAGAACATGTGGGTCCTCTTTCCAGAGTTGCCTCAGTGCAACGTGCATTATCCATTCTTGAGATGGAGGTTGAGCAAATAAATAAAGGGCATTATGAGCATTATATGCAGAAGGAAATTCATGAGCAGCCAGAGTCTCTAACAACCACAATGAGGGGAAGGCTTATACGTCGAGGATCTAGCAAATCCAAGTCTGTTCTTCTGGGTGGACTGAAAGATCACCTCAAAACAATTAGGCGTAGTAGAAGGATAGTTTTCATTGGATGTGGCACAAGTTATAATGCTGCTTTAGCAGCGAGGCCCTTCTTGGAGGAACTTTCTGGTATTCCTGTAACTATGGAAATTGCTAGTGATCTATTGGATAGGCAGGGACCAATATACAGAGAAGATACAGCCGTTTTTGTTAGTCAATCTGGTGAAACTGCAGACACTTTGCTTGCTTTGCAATATGCTTTAGATAATGGTGCATTATGTGTTGGGATAACAAACACTGTTGGTAGTGCAATAGCAAGGAAAACACATTGTGGTGTTCATATAAATGCTGGTGCCGAGATAGGTGTGGCAAGTACCAAGGCATACACAAGTCAAATAGTTGTCATGGCCATGTTGGCCCTTGCAATAGGAGGGGATACAATTTCAAGTCAAGCTAGAAGAGAAGCTATTGTAGATGGTCTATATGACCTTCCAAATAAAGTCAGAGAGGTTCTAAAGCTTGACCAGGAGATGAAGGATCTGGCACAGCTATTAATTGCTGAACAGTCTCTTCTTGTCTTTGGGAGATCATACAACTATGCTACTGCTCTAGAGGGAGCTTTGAAAGTGAAGGAAGTGGCACTGATGCATAGTGAAGGGATACTTGCTGGTGAAATGAAGCATGGCCCTCTGGCGTTAGTGGATGAAAATCTTCCGATTGTGGTCATTGCTACACGTGATGCTTGCTTCAGGTTGGTTGTGTTGAGTGTGCTATTTGATCTGCATTACGAAATTAGGAATTTGATATCGACATCTTTAATCATGTTTGACAGCAAGCAGCAGTCGGTTATACAACAACTTCATGCCCGCAAAGGCCGCCTAATAGTTATGTGTTCAAATGGGGATGCAGCTTCTGTTTGCCCTGGGGAATCTTGCAAGATCATTGAAGTTCCACAGGTTGAGGACTGTCTTCAACCAGTAATTAATGTAGTTCCATTACAGTTACTGGCCTATCATCTCACTGTCCTGAGGGGATTTAATGTTGACCAGCCTCGAAATCTTGCCAAAAGTGTAACCACACAATAA 2178 0.4229 MCGIFAYLNYNVNRERSYILQVLFNGLRRLEYRGYDSAGIAIDSSSFLSVTSDPISSSNSISISASIPPPLVFRREGNIESLVKSVYQEVSEVELNLEESFSTHAGIAHTRWATHGEPAPRNSHPQSSGPGDDFLVVHNGVITNYEVLKETLVRHGFIFESETDTEVIPKLAKFVYDKAAEAAGDQIVTFSEVVLEVMRHLEGAYALIFKSRHYPNELIACKRGSPLLLGVKELRENQENGSAFEDNKFLSKDGHPKELFLSSDAHAVVEHTKKVLVVEDGEVVHLKDGGVSILKFENDKGEHVGPLSRVASVQRALSILEMEVEQINKGHYEHYMQKEIHEQPESLTTTMRGRLIRRGSSKSKSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPFLEELSGIPVTMEIASDLLDRQGPIYREDTAVFVSQSGETADTLLALQYALDNGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISSQARREAIVDGLYDLPNKVREVLKLDQEMKDLAQLLIAEQSLLVFGRSYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPIVVIATRDACFRLVVLSVLFDLHYEIRNLISTSLIMFDSKQQSVIQQLHARKGRLIVMCSNGDAASVCPGESCKIIEVPQVEDCLQPVINVVPLQLLAYHLTVLRGFNVDQPRNLAKSVTTQ 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1973 725 SUPERFAMILY SIS domain 329 724 IPR046348 GO:0097367|GO:1901135
Lal1g1973 725 CDD SIS_GlmS_GlmD_2 540 723 IPR035490 -
Lal1g1973 725 CDD GFAT 2 286 - -
Lal1g1973 725 CDD SIS_GlmS_GlmD_1 383 508 IPR035466 -
Lal1g1973 725 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 1 632 - -
Lal1g1973 725 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 640 725 - -
Lal1g1973 725 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 2 295 IPR029055 -
Lal1g1973 725 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 305 IPR029055 -
Lal1g1973 725 Gene3D - 331 723 - -
Lal1g1973 725 ProSiteProfiles SIS domain profile. 545 715 IPR001347 GO:0097367|GO:1901135
Lal1g1973 725 Pfam SIS domain 378 505 IPR001347 GO:0097367|GO:1901135
Lal1g1973 725 Pfam SIS domain 549 612 IPR001347 GO:0097367|GO:1901135
Lal1g1973 725 Gene3D - 534 710 - -
Lal1g1973 725 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 289 IPR017932 -
Lal1g1973 725 Pfam Glutamine amidotransferase domain 101 219 - -
Lal1g1973 725 ProSiteProfiles SIS domain profile. 374 513 IPR001347 GO:0097367|GO:1901135
Lal1g1973 725 PANTHER GLUTAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE [ISOMERIZING] 2-LIKE 640 725 - -
Lal1g1973 725 PANTHER GLUTAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE [ISOMERIZING] 2-LIKE 1 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1973 Lal-Chr1 21807542 21819977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1973 106 230 PRT Gene Family AT4G38880 30.233 1.43e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1973 K00820 - gmx:100792835 1177.16