Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1966 ATGGGTTCCTGCTTCTCTTTAGAAAGCAGGAGCCCACACCCAAGTTACAGGAAGAACTCCAAGAAGAAACTTGGATCACATAGTTCTTCTGTTGAGTATTGGAAAAATGAACCAATTCATAGGATCCATGGTAGGAACTTCCTCAATGGCTCTACCCAATTTGGTTCCTTGTTTACTCAACAAGGCAAGAAGGGAACTAATCAAGATGCCATGCTTGTTTGGGAGGTTAAGGAAATGGGGGTCACTAATCTCTTGGTACCTGTTTCTAGACAGTTAGGAATTGTTGATATACCATTTTTTCTTCTGTTGAGTAGTGTTTTCACTGATTCTGCTCATCTTGTATTGCAGAACTTTTGTTCTCGGCAAGATACAATTTTCTGTGGAGTTTTTGATGGTCATGGTCCATATGGTCACATGGTTGCAAAAAGAGTGAGGGATTCTCTTCCTCTAAAACTGAATGCTCATTGGGAACATTGTGTGTCTGGTGATGAAGTCCTCAAGGAGATCAGTGTTAATGCTGCTGGAAGCATGAATTCGGAAGAGGCCACTTTTGTATCTGTTAATGAGGAATCTAGGACATCCGTTGATGCTGAAGAAATGACAAAAGACCCGGAAATATTTCATACACTTAAACAGTCCTTTCTGAAGGCATTCAAAGTTATGGATAGAGAACTAAAGACACATCCAAGTATTGATTGCTTTTGTAGTGGGACAACAGCAGTTACTCTTGTTAAGCAGGGTCGTCATCTTATTATTGGAAATGTTGGGGACTCTAGAGCTGTGATGGGTACAAGAGCTAAAGATGATTCTCTTGTTGCGGTCCAGTTAACTGTTGATCTAAAACCCAATCTTCCAGCTGAAGCAGAGAGAATTCGTAAATGTAAAGGACGTGTCTTTGCCCTTCATGATGAACCTGAAGTTGCTCGAGTTTGGTTGCCAAATAATGATTCCCCTGGCCTTGCCATGGCACGTGCATTTGGAGATTTTTGTCTTAAAGATTTTGGCTTGATATCTGTTCCAGATGTATCATACCGCCAACTCACCGAGAAGGATGAGTTTGTTGTCTTAGCAACAGATGGGATTTGGGATGTGCTCTCAAACAAAGAAGTCGTAGATATTGTTGCTGCAGCTCCAAGTCGTTCCTCAGCAGCTCGAGCACTAGTCGAGTCAGCAGTTAGAGGTTGGAGATATAAATATCCAACTTCCAAAGTGGATGACTGTGCTGTGGTTTGCCTCTTCCTGGACACAGACTTGCACCCAATATCCAGCGCTTCCAATGCCAAATCCAACGAGCGACCTAGTTCGGCAGTCCAAGTCAGCAGTGGCAATGTTTCTGGACCTGCCATTCTAGAAGGGTCAGGAACTTGCAGGGCAAGCAAATACGCGTCACATGGAGAAAGCAATGAGGAATTGTCCAAGGAAGAGGAGATTGATGCTGAGTCGGAAAAAGATTGGTCTGCTCTCGAAGGAGTATCTCGGGTAAACACATTATTAAATCTCCCAAGATTTGTCCCAGACAAAGAAGACGACAAAGCGGCAGCAGGGATGAGAAAACGCAAATGA 1563 0.4319 MGSCFSLESRSPHPSYRKNSKKKLGSHSSSVEYWKNEPIHRIHGRNFLNGSTQFGSLFTQQGKKGTNQDAMLVWEVKEMGVTNLLVPVSRQLGIVDIPFFLLLSSVFTDSAHLVLQNFCSRQDTIFCGVFDGHGPYGHMVAKRVRDSLPLKLNAHWEHCVSGDEVLKEISVNAAGSMNSEEATFVSVNEESRTSVDAEEMTKDPEIFHTLKQSFLKAFKVMDRELKTHPSIDCFCSGTTAVTLVKQGRHLIIGNVGDSRAVMGTRAKDDSLVAVQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDVSYRQLTEKDEFVVLATDGIWDVLSNKEVVDIVAAAPSRSSAARALVESAVRGWRYKYPTSKVDDCAVVCLFLDTDLHPISSASNAKSNERPSSAVQVSSGNVSGPAILEGSGTCRASKYASHGESNEELSKEEEIDAESEKDWSALEGVSRVNTLLNLPRFVPDKEDDKAAAGMRKRK 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1966 520 MobiDBLite consensus disorder prediction 1 24 - -
Lal1g1966 520 PANTHER ALPHABET, ISOFORM E-RELATED 111 492 - -
Lal1g1966 520 PANTHER ALPHABET, ISOFORM E-RELATED 1 76 - -
Lal1g1966 520 MobiDBLite consensus disorder prediction 423 446 - -
Lal1g1966 520 ProSiteProfiles PPM-type phosphatase domain profile. 91 414 IPR001932 -
Lal1g1966 520 SMART PP2C_4 43 412 IPR001932 -
Lal1g1966 520 Pfam Protein phosphatase 2C 143 392 IPR001932 -
Lal1g1966 520 Gene3D - 49 416 IPR036457 -
Lal1g1966 520 CDD PP2Cc 111 414 IPR001932 -
Lal1g1966 520 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 111 492 - -
Lal1g1966 520 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 76 - -
Lal1g1966 520 MobiDBLite consensus disorder prediction 460 484 - -
Lal1g1966 520 SUPERFAMILY PP2C-like 56 415 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1966 Lal-Chr1 21744988 21750748 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1966 1 507 PP2C-type Phosphatase Gene Family AT3G02750 56.514 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1966 - - gmx:100790373 728.013