Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1948 ATGGTAGAATCCCGCCTTAGGTGGTTTGGACATGTGTGGACAAGACCACTAGAAGCCCCAATAAAGAGAGTAGATCAAATGGAGAAGGAGATGGAAGCCAATGATCATAGAATTTACCAAGTTGCAAGTGTAAAACATGAATGGAACTGTATCAAAACATTTCCTGATTTATCCGGGACAGGGAAAGCTACCTGTGTAAAATTTGGCCAGGATTCAAAATATATAGCAGTTGGATCAATGGACCGGAATCTTCGAATATTCGGATTGCCTATAGAAGATGGTTCAGCCGAGTCATGA 297 0.4141 MVESRLRWFGHVWTRPLEAPIKRVDQMEKEMEANDHRIYQVASVKHEWNCIKTFPDLSGTGKATCVKFGQDSKYIAVGSMDRNLRIFGLPIEDGSAES 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1948 98 SUPERFAMILY WD40 repeat-like 37 89 IPR036322 GO:0005515
Lal1g1948 98 SMART WD40_4 47 88 IPR001680 GO:0005515
Lal1g1948 98 Gene3D - 32 96 IPR015943 GO:0005515
Lal1g1948 98 PANTHER PRE-MRNA-PROCESSING FACTOR 19 34 98 IPR038959 GO:0000398|GO:0000974|GO:0006281|GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1948 Lal-Chr1 21587599 21590186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1948 31 98 U-box Gene Family AT1G04510 72.059 1.52e-28 105