Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1944 ATGTTGTTTACATTTCTTTTATGTCACTCAATGCAGGATGAGATTTCAAGCCCGATTAGTACTCCGATTTTCGAACTTTGTGACGCCGAATTGTTCTCTGATACGGTGCAGAATTCCGAGGTTACTTCCACCTCAAATTGTTGCTACGAGGAGAACACGTCGTATGCAACAAATATATCTCCAACATTAGATGTACATAATAAGATCAATAGCAATAGCAATATCAACATCGTCACCACTCCAACTAGTCCTACTGCAACGAGCACCAACATCAACAACGATAACACGACAAACAGCAATAATCTGTCGCTTATCTTCGACTCGCAAGAAGATATTGACATTGACATCTCTGCCTCCATAGACTTCTCATCATCTCCATCTTTCACCATTCCCTCATTTCTCCCGGTCACAACTCATCAGGAGCAATTCGATTTTGCTTCGGTGCAGCATCAGGCCCAACTAGCACCAGGATCAGTTCTGAAGGGACTACTTCAGTATCCAACTGATCCTATTGTTGCACCTTTAATGGGAGCTCAATTACCATCAGTTTTTGATGATATTTGCATATCTTCCATACCTTCTTATATGCCTCTTAACCCTTCATCGGGGAATTGCTCTTATCTCGGTCCGGGTATGGGAATGTACATGCCTCCTGGTCCAGGGAATCTTACTACTACCTTGTCTGCTGAAAGTTCTGGGCTATTTGGTGGGAACATTCTTTTGCCTTCTGAACTGCAACCACAAGAATTGGACTATCATGGAGTAAATGGTGGAATATTTTGTACAGATTCAACTCAGAGGGTGTTTAACCCACCTGACCTTCAGTTTGTGTCCCAGACACTTGGTACTGAAAGTCAGCAACTGGCAGCTGGGGCTGGGAATTCTGGCACTTTGGCACCAGAAATCTCAAACTTGGAGGACTCGACCTTAAAGGTTGGAAAACTTTCTGTTGAGCAAAGGAAAGAGAAGATTCATAGATACATGAAGAAAAGAAATGAAAGAAACTTCAGCAAGAAAATTAAGTATGCCTGCCGCAAAACTCTGGCAGATAGTAGACCACGTGTTAGAGGAAGGTTTGCCAAGAATGATGATTTTGGAGAGACACAGAGACCAGCTAGTAGCAATCATGAAGAAGATGAAGAAGATATAGTTGTGAAAGAAGATGCTGATAATATGGTTGATTCCTCAGATATCTTTGCTCATATCAGTGGGGTCAACTCCTTCAAATGCAACTATTCCATCCAGTCATGGATTTGA 1257 0.4208 MLFTFLLCHSMQDEISSPISTPIFELCDAELFSDTVQNSEVTSTSNCCYEENTSYATNISPTLDVHNKINSNSNINIVTTPTSPTATSTNINNDNTTNSNNLSLIFDSQEDIDIDISASIDFSSSPSFTIPSFLPVTTHQEQFDFASVQHQAQLAPGSVLKGLLQYPTDPIVAPLMGAQLPSVFDDICISSIPSYMPLNPSSGNCSYLGPGMGMYMPPGPGNLTTTLSAESSGLFGGNILLPSELQPQELDYHGVNGGIFCTDSTQRVFNPPDLQFVSQTLGTESQQLAAGAGNSGTLAPEISNLEDSTLKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGETQRPASSNHEEDEEDIVVKEDADNMVDSSDIFAHISGVNSFKCNYSIQSWI 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1944 418 PANTHER CCT MOTIF FAMILY PROTEIN 12 418 - -
Lal1g1944 418 MobiDBLite consensus disorder prediction 355 380 - -
Lal1g1944 418 Pfam CCT motif 320 362 IPR010402 GO:0005515
Lal1g1944 418 ProSiteProfiles CCT domain profile. 320 362 IPR010402 GO:0005515
Lal1g1944 418 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 12 418 - -
Lal1g1944 418 MobiDBLite consensus disorder prediction 355 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1944 Lal-Chr1 21556305 21559597 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1944 299 368 C2C2-CO-like Transcription Factor Family AT5G24930 40.000 1.20e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal1g1944 CCT 5.5e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1944 - - gmx:100793417 522.316