Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1943 ATGACAACCGATGCAACAGTTGAAGAAGTTGTGGCGGTGCCTTCACCGGAACCGGAGATTGGTTCCAAAAACAAACTAGAGAGACAGTGGACTTTCTGGTTGGATAACCAATCCAAAACGAAGCAAGGTGCTGCTTGGGGTTCCTCTCTTCGCAAAATCTACACCTTTAACACCGTCGAAGAATTTTGGTGTGAGACCGCTAGCGTTTTATATGATCAAATATTCAAGCCCAGCAAGTTGGTTGGGAATGTAGACTTCCATTTGTTCAAGACTGGAGTTGAACCAAAATGGGAAGATCCTGAGTGTGCCAATGGAGGAAAGTGGACTGTTGCTAGCAACAGAAAAGCTAACCTTGATACCATGTGGCTTGAAACACTTATGGCTTTAATTGGGGAGCAATTTGATGATGCTGAGGATATATGTGGTGTGGTTGCGAGTGTTCGCCAAAGGCAGGACAAGCTTTCGTTATGGACAAAAACCGCTGCAAATGAGGCTGCCCAAATGAGCATTGGTAGGAAGTGGAAGGAGATAATTGATGTTACGGACAAGATAACATATAACTTCCATGATGATGCTAGAAGGGAAAGATCTTCAAAGGGTCGATACAGTGTATAA 615 0.439 MTTDATVEEVVAVPSPEPEIGSKNKLERQWTFWLDNQSKTKQGAAWGSSLRKIYTFNTVEEFWCETASVLYDQIFKPSKLVGNVDFHLFKTGVEPKWEDPECANGGKWTVASNRKANLDTMWLETLMALIGEQFDDAEDICGVVASVRQRQDKLSLWTKTAANEAAQMSIGRKWKEIIDVTDKITYNFHDDARRERSSKGRYSV 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1943 204 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 8 198 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lal1g1943 204 PANTHER BNAA08G29940D PROTEIN 8 198 - -
Lal1g1943 204 SUPERFAMILY eIF4e-like 6 198 IPR023398 -
Lal1g1943 204 ProSitePatterns Eukaryotic initiation factor 4E signature. 85 108 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Lal1g1943 204 Pfam Eukaryotic initiation factor 4E 25 185 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lal1g1943 204 Gene3D RNA Cap, Translation Initiation Factor Eif4e 18 204 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1943 Lal-Chr1 21541765 21545132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1943 1 196 Eukaryotic Initiation Factors Gene Family AT5G35620 64.039 1.35e-85 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1943 K03259 - nnu:104600958 325.094