Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1933 ATGGAAGGAGAGATTAGGCAAGATAACTCTGTAATGAAGAAAATGACATTTACAGGGTCCTCTGTAAATGAGGTTGATGGACCAAACATACATTCTGAAATGAGTTGTAGCCCATGGACTTGCATCCCTAACTCTGTTGAATATCTAGCTGAATCTTCCTCCTCAACTTATTTTCCAAAGGCTACTAGTGAAAGCATCACTGGGTGCAATTATTATTATCCATCACTTAGTACCATAAACAATGTTAATGAGGTCAATGCAACTGACTTTTATAACAACATTGGAAAAGCCTGTGCCTCAAAAACACCCGATTATTCTTCTACTGAAGTAGACAGTAGCAAGGTGGGGTTTTGGAGGCCTGATGAAGGCAAAGAGGCACACCAGGAAGCAATTCAATATGGAAGTACTAAACATCATCATCTTTTCTATGCTGATAGTCATGCCTCATGGACACCAGAACCAGTTGGAGATAAGCATAATGTTTCACAGCTTGATCCAAGGGTAACGGTTGTTGCACCTGCTTTACTTCCCAAAAAACAGAAAACTTATGCCGTTGACCGTCTACGCAGACAACGTATTGCTGATAATCTCAAAGCCTTACACGAATTGCTTCCAATTCCAGCTGAGCGTGGTCAAGCTTATGTGCTGGACGACATCATTGACTATGTCAAATATTTGCAGCTTCAAATAAAGGGCTATGGACATTATATAGAGAAACAGATGCTGAATGAACCCCTTGAGGAGATGATGGGAAAACTACTTGAGGAAAATCCAGCAGCAGCAACTCAGCTTCTGGAGAGTAAGGGTCTTTACCTTATGCCTATAACTCTGGTTGAAGACTTGGGTGAAGCTATGCAAATGCTTGGGGGGAATGCACTTGTTTGA 885 0.4136 MEGEIRQDNSVMKKMTFTGSSVNEVDGPNIHSEMSCSPWTCIPNSVEYLAESSSSTYFPKATSESITGCNYYYPSLSTINNVNEVNATDFYNNIGKACASKTPDYSSTEVDSSKVGFWRPDEGKEAHQEAIQYGSTKHHHLFYADSHASWTPEPVGDKHNVSQLDPRVTVVAPALLPKKQKTYAVDRLRRQRIADNLKALHELLPIPAERGQAYVLDDIIDYVKYLQLQIKGYGHYIEKQMLNEPLEEMMGKLLEENPAAATQLLESKGLYLMPITLVEDLGEAMQMLGGNALV 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1933 294 PANTHER TRANSCRIPTION FACTOR BHLH66-LIKE ISOFORM X1 26 278 - -
Lal1g1933 294 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 178 242 IPR036638 GO:0046983
Lal1g1933 294 CDD bHLH_AtbHLH_like 187 231 IPR045239 -
Lal1g1933 294 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 177 226 IPR011598 GO:0046983
Lal1g1933 294 Gene3D - 177 252 IPR036638 GO:0046983
Lal1g1933 294 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 26 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1933 Lal-Chr1 21478512 21481393 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1933 185 284 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 35.338 1.18e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1933 - - lang:109356361 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1933 1 21478512 21481393 Lal1g1933 1 21478512 21481393 ECH