Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1919 ATGGGCAACACGGACACTGGTTACCCTTCATCAAGGGTAGCTATCCCTCCAGCTCAACCTTTCTTGAAGTCTCTGAAATACTCTCTGAAAGAGACTTTCTTCCCAGATGAGCCATTCAGGCAGTTCAAGAACCAGACAGCTTCAAAGAGGTTAGTACTTGGCCTTAAATACTTCTTCCCTATATTCAAGTGGGGGCCACAATACACAATCAAGTTCTTGAAATCAGACATCATTGCTGGCATCACCATAGCTAGTCTTGCTATTCCTCAAGGCATCAGTTATGCCAAACTTGCCAACCTTCCTCCCATTCTTGGTCTTTATTCGAGCTTTATACCACCATTGATTTATGCAATGATGGGTAGCTCAAGGGATTTGGCAGTGGGAACAGTAGCAGTTGGATCACTTCTCATGGCTTCAATATTGGGACGTGAGGTTAATCCAAAAGAGAATCCAAAGCTTTTTATCCACCTTGCTTTCACAGCTACATTCTTTGCTGGACTCTTCCAAGCATCACTTGGTCTATTTAGGCTAGGGTTTATGGTGGATTTTCTATCACATGCAGCCATAGTAGGGTTCATGGGAGGAGCAGCCACTGTGGTTTGCCTACAACAACTGAAAGCTATTCTTGGACTTGAACATTTCACTCACGAAGCTGATGTTGTATCAGTAATGCGATCTGTTTTTACTCAAACTCATCAGAGCAAACGGCAAGCGAGGTTGTTCTGGGTGTCAGCAATGGCACCTTTAACATCAGTTATATTGGGAAGCTTGTTGGTTTATTTCACTCATGCTCACAAACACGGCGTTCAAGTGATAGGAGAATTGAAGAAGGGGCTAAATCCAGTTTCAGTGAGAGATTTGGTATTTGTGTCACCTTATATGACCACAGCCATCAAAACTGGTCTTATCACTGGCATTATTGCTCTAGCTGAGGGAATAGCAGTGGGAAGAAGCTTTGCAATGTTTAAGAATTACCATATTGATGGCAACAAAGAAATGATTGCTTTTGGAACCATGAACATACTTGGTTCCTTTACCTCTTGTTACCTCACAACAGGACCGTTCTCGCGATCAGCTGTGAACTACAATGCCGGGTGCAAGACTGCAGCATCAAACATTGTAATGGCAATTGCAGTCATGCTGACATTGCTATTCTTGACACCATTGTTCCATTACACTCCATTGGTGGTTTTAGCTTCAATAATTGTATCAGCAATGCTTGGACTCATAGATTATGAAGCAGCTATTCATTTATGGAAAATTGACAAATTTGATTTCCTAGTGTGCATCAGTGCATATATGGGAGTAGTCTTTGGCAGTGTTGAAATTGGCCTAGTCATAGCAGTTGTAATATCTGTACTTAGAGTACTTTTATTTGTTGCTAGACCGAGGACATTTGTTTTAGGCAACATTCCAAATTCTGGAGTATATAGAAATGTGGAACAGTATCCAAATGCAAACCATATTCCAGGAATCCTAATTCTTGAAATTAATGCTCCAATTTACTTTGCCAATGCAAGCTATTTAAGAGAGAGGATCCTAAGATGGATTGATGAAGAGGAAGACAAAATTAAAGCTACAGGGAAGACCAGTTTGGTTTATGTTATAATGGATATGTCTGGTGTTGGGAACATTGATGCAAGTGGAATAAGCATGCTTGAAGAGGTCAAGAAGATTATTGATAGAAGAGGACTCCAACTTGTTTTGGTAAATCCTGGAAGTGAGGTGATGAAGAAACTCCACAAAGCCAAGTTCCTTGAAGAAATAGGCCATAACTGGATTTACCTTACAGTTGAAGAAGCTGTTGGAGCATGCAACTTCATGCTTCAGACATACAAACCAAACCACACAAAAGATGAATCAGAAGGTTGGAACAATGTCTGA 1884 0.4087 MGNTDTGYPSSRVAIPPAQPFLKSLKYSLKETFFPDEPFRQFKNQTASKRLVLGLKYFFPIFKWGPQYTIKFLKSDIIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMASILGREVNPKENPKLFIHLAFTATFFAGLFQASLGLFRLGFMVDFLSHAAIVGFMGGAATVVCLQQLKAILGLEHFTHEADVVSVMRSVFTQTHQSKRQARLFWVSAMAPLTSVILGSLLVYFTHAHKHGVQVIGELKKGLNPVSVRDLVFVSPYMTTAIKTGLITGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAFGTMNILGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMAIAVMLTLLFLTPLFHYTPLVVLASIIVSAMLGLIDYEAAIHLWKIDKFDFLVCISAYMGVVFGSVEIGLVIAVVISVLRVLLFVARPRTFVLGNIPNSGVYRNVEQYPNANHIPGILILEINAPIYFANASYLRERILRWIDEEEDKIKATGKTSLVYVIMDMSGVGNIDASGISMLEEVKKIIDRRGLQLVLVNPGSEVMKKLHKAKFLEEIGHNWIYLTVEEAVGACNFMLQTYKPNHTKDESEGWNNV 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1919 627 PANTHER SLC26A/SULP TRANSPORTER-RELATED 234 625 - -
Lal1g1919 627 PANTHER SLC26A/SULP TRANSPORTER-RELATED 12 233 - -
Lal1g1919 627 SUPERFAMILY SpoIIaa-like 484 605 IPR036513 -
Lal1g1919 627 ProSitePatterns SLC26A transporters signature. 102 123 IPR018045 GO:0008271|GO:0008272
Lal1g1919 627 PANTHER SULFATE TRANSPORTER 12 233 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal1g1919 627 PANTHER SULFATE TRANSPORTER 234 625 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal1g1919 627 ProSiteProfiles STAS domain profile. 482 605 IPR002645 -
Lal1g1919 627 CDD STAS_SulP_like_sulfate_transporter 483 598 - -
Lal1g1919 627 Gene3D STAS domain 462 607 IPR036513 -
Lal1g1919 627 Pfam Sulfate permease family 73 431 IPR011547 GO:0016021
Lal1g1919 627 Pfam STAS domain 483 601 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1919 Lal-Chr1 21416425 21422244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1919 12 627 Inorganic Solute Cotransporters AT4G02700 66.197 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1919 K17471 - gmx:100791091 1065.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1919 1 21416425 21422244 Lal1g1919 1 21416425 21422244 ECH
Lal1g1919 1 21416425 21422244 Lal13g0166 13 1051575 1057039 PCT
Lal13g0166 13 1051575 1057039 Lal1g1919 1 21416425 21422244 PCT