Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1917 ATGCGGTTATGCCCCATGAGGACTTTCTTCACTGCTGATTCATGTAAAGATTCAAACCCTAATGCTCTAAGTCCACAATCATGGCTTCAAATTGAAAGAGGGAAACTTCCCAAGTTGTCATCACAATCCTCTTCAGCATCAATAGAGTCTCTGATCAAGGTTGCACAGCCACCTATACTACCATTCTTTAAACCTATTGATTACGTGGAAGTTTTAGCTCAAATCCATGAAGAACTTGAATCATGTGTTCCACAAGAGCGGTCAAATTTGTTGTTGTTACAATACCAGGTCTTTAGAGGCCTCGGCGAAGTTAAATTGATGCAAAGAAGCCTTCGGGCAGCGTGGCAGAGAGCCGATACGGTTCATGAGAAGATTATATTTGGGGCATGGTTGAAGTATGAAAAGCAAGGGGAAGAGTTAATAGCTGAATTGCTGAGGAGTTGCGGTAAATGTGCACAAGAGTTTGAGCCCATAGATGTAGCATCTAATCTTTCTTTCGATGTAAATGTGTGTTCCCAGGAGAGAATTTTGATAAATGGGAACCAAATTTCACAAGATGTTATTTTCACAATCGGAAATGAGAAGATAATTTGTGATAGACAAAAGATTTCTGAACTTTCGGAACCATTTCATGCAATGCTGAAGGGGTATTTCAGTGAATCACATTCTGAGAGTATAGATTTGTCTGAAAACAATATTTCTCCTTCGGGTATGAGAGCAATAAGTTATTTCAGTTTGACTGGCATTTTAATTGAGGTCCCTCCAAATCTTTTGTTGGAAATATTAGTTTTTGCAAACAAGTACTGTTGTGAAAGACTCAAAGATGCCTGTGATAGAAGACTTGCTTCTTTAGTTTCATCTAAAGAAGATGCCGTGGAACTCATGGAATATGCTCTAGATGAGAATTCATGTGTCCTTGCTGCAACCTGTTTACAAGTCCTTTTACGTGATCTTCCGAACTGTTTGAATGATAATCGGGTTGTGGAGATATTTATACACACTAATAGGCAGCAACTCGAAGTCATGGTTGGACCAACTTCATTTGCTCTTTTTTGTTTCTTAAGTGAAGTTTCTATGAACCTTAATTCTAGTTCAGACACCACAGCTCATTTCCTGGAACGGCTAGTTGATTTTGCTGAAAATGACAAGCAGAGAGTTCTGGGTTTTCATCAATTGGGATGTGTAAGACTCTTAAGGAAAGAATATGACGAAGCATGTTGCCTTTTCAAGGATGCTGTAAATTCAGGGCATGTTTATTCGGTTGCAGGTTTAGCGAGACTAGACTACATAAAGGGTGAGATGCTTTTATCGTATGAGAAACTCAGCTCAGTTATATCATCTGTTACTCCACTCGGATGGATGTACCAGGAAAGATCACTATATTGTGACGACGAGACAAGATGGAAGGACCTTGAGAAAGCGATTGATCTGGACCCGACTCTTATATATCCTTACATGTACAGGGCTGCGTCTTTCATTAAGACACATGATGCTCAAGATGCACTGGCCGAAATCAATCGGATTCTCGGTTTCAAACTTTCATTAGAATGCTTGGAATTACGGTTTTTTATCTACCTGGCTCTCGAGGACTACAAAGCAGCTCTATATGATGTTCAAACGATTCTTACTCTTTGTCCGGATTATAGAGTGTTTGAGGGGCGCGTTGCTGCTTCCCAACTCTGTACTCTTGTACGTGAGCATGTTGAACATTGGACAAAAGCAGATTGTTGGGCACGGTTATATGATTGTTGGTCTGCTGTAGATGATATTGGTTCTCTATCTGTTATCTACCAGATGCTTGAATCTGATGCGGCTAAAGGTGTTCTGTACTTCAGACAGTCACTGCTTCTCCTGAGGTTGAGCTGTCCAGAGGCAGCGATGCGCAGTTTACAATTAGCTCGGCAACATGCATCAACTGAGCATGAACGACTTGTATATGAGGGGTGGATCTTGTATGATACAGGTTATTATGATGAAGGGCTCCGAAAAGCTGAAGAGTCTATCAGTATGAAGAGGTCTTTTGAGGCTTTTTTTCTGAAGGCCTATGCACTGGCTGACTCTAGTCTAGATTCATCATGTTCTTCAACTGTTATTTTGCTTCTGGAAGATGCCTTGAAATGTCCTTCAGATAATCTGCGCAAAGGTCAGGCACTGAACAATCTTGGAAGTGTTCTCGTTGACTGTGAAAAGTTGGACTCAGCAGCCAATTGCTATATCAATGCGCTTAACATCCAACACACACGAGCCCATCAGGGTCTTGCTCGTGTTCATTGTCTTAAGAATGATAAGGTTGCTGCTTACAAGGAAATGACTGAACTTATTCAGAAGGCAAAAAACAATGCATCTGCATATGAGAAGAGATCTGAGTACTGTGATCGCGAACTTGCAAAGGCAGATCTGGAGATGGTGACTAGATTAGATCCACTCCGGGTGTATCCCTATAGATACCGTGCTGCAGTATTGATGGACAATCATAAGGAAGAGGAAGCCATTGCAGAACTCTCTAAAGCTATTGCATTCAAAGCTGATTTGCATCTCTTGCATCTACGTGCTGCATTTCATGAACACAAAGGGGATGTCTTAGGTGCTCTAAGAGACTGTCGTGCCGCACTCTCCGTGGATCCAAACCACCAAGAAATGTTGGAACTTCACAGTCGAGTTAATAGCCACGAGCCATGA 2679 0.4143 MRLCPMRTFFTADSCKDSNPNALSPQSWLQIERGKLPKLSSQSSSASIESLIKVAQPPILPFFKPIDYVEVLAQIHEELESCVPQERSNLLLLQYQVFRGLGEVKLMQRSLRAAWQRADTVHEKIIFGAWLKYEKQGEELIAELLRSCGKCAQEFEPIDVASNLSFDVNVCSQERILINGNQISQDVIFTIGNEKIICDRQKISELSEPFHAMLKGYFSESHSESIDLSENNISPSGMRAISYFSLTGILIEVPPNLLLEILVFANKYCCERLKDACDRRLASLVSSKEDAVELMEYALDENSCVLAATCLQVLLRDLPNCLNDNRVVEIFIHTNRQQLEVMVGPTSFALFCFLSEVSMNLNSSSDTTAHFLERLVDFAENDKQRVLGFHQLGCVRLLRKEYDEACCLFKDAVNSGHVYSVAGLARLDYIKGEMLLSYEKLSSVISSVTPLGWMYQERSLYCDDETRWKDLEKAIDLDPTLIYPYMYRAASFIKTHDAQDALAEINRILGFKLSLECLELRFFIYLALEDYKAALYDVQTILTLCPDYRVFEGRVAASQLCTLVREHVEHWTKADCWARLYDCWSAVDDIGSLSVIYQMLESDAAKGVLYFRQSLLLLRLSCPEAAMRSLQLARQHASTEHERLVYEGWILYDTGYYDEGLRKAEESISMKRSFEAFFLKAYALADSSLDSSCSSTVILLLEDALKCPSDNLRKGQALNNLGSVLVDCEKLDSAANCYINALNIQHTRAHQGLARVHCLKNDKVAAYKEMTELIQKAKNNASAYEKRSEYCDRELAKADLEMVTRLDPLRVYPYRYRAAVLMDNHKEEEAIAELSKAIAFKADLHLLHLRAAFHEHKGDVLGALRDCRAALSVDPNHQEMLELHSRVNSHEP 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1917 892 SUPERFAMILY TPR-like 470 744 IPR011990 GO:0005515
Lal1g1917 892 Gene3D Tetratricopeptide repeat domain 789 891 IPR011990 GO:0005515
Lal1g1917 892 Gene3D Tetratricopeptide repeat domain 361 551 IPR011990 GO:0005515
Lal1g1917 892 PANTHER ETO1-LIKE PROTEIN 1 6 892 - -
Lal1g1917 892 Coils Coil 760 787 - -
Lal1g1917 892 Gene3D Potassium Channel Kv1.1; Chain A 178 324 IPR011333 -
Lal1g1917 892 Pfam BTB/POZ domain 185 281 IPR000210 GO:0005515
Lal1g1917 892 PANTHER ETO1-RELATED 6 892 IPR044631 GO:0010105
Lal1g1917 892 SMART BTB_4 185 285 IPR000210 GO:0005515
Lal1g1917 892 SUPERFAMILY TPR-like 702 883 IPR011990 GO:0005515
Lal1g1917 892 SUPERFAMILY POZ domain 182 281 IPR011333 -
Lal1g1917 892 Gene3D Tetratricopeptide repeat domain 604 777 IPR011990 GO:0005515
Lal1g1917 892 SMART tpr_5 515 548 IPR019734 GO:0005515
Lal1g1917 892 SMART tpr_5 715 748 IPR019734 GO:0005515
Lal1g1917 892 SMART tpr_5 811 844 IPR019734 GO:0005515
Lal1g1917 892 SMART tpr_5 846 877 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1917 Lal-Chr1 21398948 21405637 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lal1g1917 BTB 9e-05 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1917 - - aprc:113861325 1482.62