Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1914 ATGAGGAGAGGGGTAATAGGAGAACAACAACAACAACAAATGGGTTGTATGACCACTTTCCTTCACATCTTCCACCGCCGCCACCACTTCCTCACCGGAAAACGCCTTCCTCCCACCCATAATTACATCATTACCTCACCACCAACTACACCTGGCTCAGAGAAACAACGACCATCAATTAGTGTGGTTGCTAGACTAATGGGTTTGGATGAGCCAACTTCAGGTTCGGAAACAGACCCATCTTCTGAAGTGAACAGATATCATCACTCTCTACCTCTGCCTCATGATCATTATCGTTTCTTTGATACTAATAACAATTTGCGGTTGAAAATAAAAGCAAACAATGCATCAGATTCAAAATATAGAGGAAAAAACAAGAGTGGTTGTTTCTATGATTCTGGTGATTATTTCCCAGAGAAAACAAAAAAGAAGATTGAGAGAAGATTGAAGAGGAGAGGAATAGATGATGAGGCTTATAAAGATGATGTTAAACAAATTCTTGAGGCGTTGCAGCTTAAAGGCCTTCTTCATTCAAACAATTACAAATCCAATAAAATCAAACCTATAAGGGCTCCATTGCAAGACAACGGAAGGGACTTGAGGCAGCGTCGGAGTCCTAACCGGATGAGTAATGTGCCGGAGGAGGATCAATCCTCCACCCTTTCTCATTCCAGTTTAACAACCATCATTTCAGAGAGGTATAAGATGGAAGAGTACAGGAATGTATTAGAGAGGTGTGATAAGCTTCTAAACAGCATAGCAGAAATGACAGCAACCACAACTGAGTTACAACAACCTAGTCCTGTATCTGTCTTTGACTCTTCCTTTTACAAAGACGATTCACCTTCTCCACTAATCAAACGCTGCATTCACTACAAAGAAGTAAGAAGAGACTCGGAGGAAGATAAGATGTGGAGTGCAGATTTATGTGAGAATGGAAGAAAGTGTGAAAATAGCGACGATTTTATGTATGTTTCTGAAATAGTGCGTGCTTGTAACTACTTTCCACACGACACAAACGTTTTCATGTTACTGGAAAAGCAACAATTCCTGAAGGGAAATGACACTTCCAAAACCTCCATGCTCCGAAGACGTTTAATATTCGACATAGTTCAGGAAATCCTTAACAAGAACAAACGTTTGCCACCTTGGAAGGCAGTTAATTCTGTTAATATATGGTTAGAGTTTAAGAGAATGAGAGAGAGGGAAGAAGAGAAATGTTCAGAGGGGTTGGTGGATGTAACATGTTCGATATTAAGGAAAGACATGGCACAGGAAATGATGAATGAATGCTGTGTGGAGATGGGAGATGTTGTTTTGGATTTAGAACGTCTTCTGTTTAAAGATCTCGTTGGACAAATCATTCGAGATTTAGCATCATTTAAGATACCACTTTCAATGTTTCCTAGGAAATTCATGTAG 1422 0.3994 MRRGVIGEQQQQQMGCMTTFLHIFHRRHHFLTGKRLPPTHNYIITSPPTTPGSEKQRPSISVVARLMGLDEPTSGSETDPSSEVNRYHHSLPLPHDHYRFFDTNNNLRLKIKANNASDSKYRGKNKSGCFYDSGDYFPEKTKKKIERRLKRRGIDDEAYKDDVKQILEALQLKGLLHSNNYKSNKIKPIRAPLQDNGRDLRQRRSPNRMSNVPEEDQSSTLSHSSLTTIISERYKMEEYRNVLERCDKLLNSIAEMTATTTELQQPSPVSVFDSSFYKDDSPSPLIKRCIHYKEVRRDSEEDKMWSADLCENGRKCENSDDFMYVSEIVRACNYFPHDTNVFMLLEKQQFLKGNDTSKTSMLRRRLIFDIVQEILNKNKRLPPWKAVNSVNIWLEFKRMREREEEKCSEGLVDVTCSILRKDMAQEMMNECCVEMGDVVLDLERLLFKDLVGQIIRDLASFKIPLSMFPRKFM 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1914 473 Pfam Domain of unknown function (DUF4378) 323 451 IPR025486 -
Lal1g1914 473 MobiDBLite consensus disorder prediction 192 210 - -
Lal1g1914 473 PANTHER LONGIFOLIA PROTEIN 182 471 IPR033334 GO:0051513
Lal1g1914 473 PANTHER LONGIFOLIA PROTEIN 6 42 IPR033334 GO:0051513
Lal1g1914 473 PANTHER LONGIFOLIA PROTEIN 52 184 IPR033334 GO:0051513
Lal1g1914 473 MobiDBLite consensus disorder prediction 188 223 - -
Lal1g1914 473 PANTHER OS11G0587300 PROTEIN 52 184 - -
Lal1g1914 473 PANTHER OS11G0587300 PROTEIN 6 42 - -
Lal1g1914 473 PANTHER OS11G0587300 PROTEIN 182 471 - -
Lal1g1914 473 MobiDBLite consensus disorder prediction 70 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1914 Lal-Chr1 21356883 21362212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1914 53 459 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 36.099 1.41e-73 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1914 - - lang:109355742 600.512