Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1898 ATGTCTTTTACCGGCAACCGGGAAGTGAAAATAGTTCAGAAGTCGGTCTGGCAGAAACAGATTTTTGAGATGGAAGAAGAAATGAACAGGAATAATGAAACTTACTGTCAGGCAGAGGGTTTAGATGAATTTAATGGTAGTGAAGATGAAAATGTGAATGAAGTAGAGGAGTTAAATTTTGAAGAGATAAATTTTCAATTATTAAATGAAGATGATGTGAAGAAATATAGGTTTTTAAACAATGATATCGCTTACAAATTTTATAAGATGTATGGTATGAAGAAAGGATTTGGCATTAGAAAATATCATACTCGGCGAAACAAGGATGGTGAAATTATATGGCAATCATTTTTTTGTGATAGGGAAGGATTTAGAGATAAAAAAATGAATTGGTTCGGAAGAGGGCGCCGAGAAAAGAGACTAGATGTGGTTGTTTAG 438 0.3356 MSFTGNREVKIVQKSVWQKQIFEMEEEMNRNNETYCQAEGLDEFNGSEDENVNEVEELNFEEINFQLLNEDDVKKYRFLNNDIAYKFYKMYGMKKGFGIRKYHTRRNKDGEIIWQSFFCDREGFRDKKMNWFGRGRREKRLDVVV 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1898 145 Pfam FAR1 DNA-binding domain 86 131 IPR004330 -
Lal1g1898 145 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 22 130 - -
Lal1g1898 145 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 22 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1898 Lal-Chr1 21228554 21229659 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal1g1898 FAR1 1.5e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1898 - K17604 lang:109327968 121.709